| New model in OGS2.0 | DPOGS202279 |
|---|---|
| Genomic Position | scaffold3642:+ 9808-14809 |
| See gene structure | |
| CDS Length | 915 |
| Paired RNAseq reads | 326 |
| Single RNAseq reads | 1525 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004935 (1e-76) |
| Best Drosophila hit | CG1753, isoform B (9e-78) |
| Best Human hit | cystathionine beta-synthase (4e-75) |
| Best NR hit (blastp) | PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] (3e-87) |
| Best NR hit (blastx) | predicted protein [Nematostella vectensis] (2e-86) |
| GeneOntology terms | GO:0004122 cystathionine beta-synthase activity GO:0005737 cytoplasm GO:0030170 pyridoxal phosphate binding GO:0006535 cysteine biosynthetic process from serine GO:0019343 cysteine biosynthetic process via cystathionine |
| InterPro families | IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit |
| Orthology group | MCL10692 |
Nucleotide sequence:
ATGTTGAGCGAGTTCTCTCTACCGGCTCCTCTGTGGTATGTATCACGCGGTGCGTGGGGT
TCCCGATGCCGGCCGGCTAGACTGGTAGCCTGGCTCCTGCGTCGGAGGCTGTTACTGCAA
CTGCACACCTACGTGCAGTTCAATTCGCCGCACCACGCGAACTGGCCGCAACACCCACTC
GCAGGATACAGATGTATTATTGTGCTACCGGAAAAGATGTCAGATGAAAAGGTGAACACG
CTCCGTGCATTGGGTGCAGAAATCATCAGGACTCCGACCGAGGCAGCTTCTGAGTCCCCC
GATAGTAACATCATGGTTGCGAGACGTTTGTCAAACGAAATACCTGATGCTGTACTCTTA
GATCAGTACAATAATGTGTGCAACCCGTTAGCTCATTATGATGGCACCGCTGAAGAAATC
CTATGGTCGCTTGAGAATGACGTGGATATGGTGGTGATAGGAGCTGGAACTTGTGGGACA
ATCTCCGGGGTCGCACACAAAATCAAGGAAAAGTGTCCCAAATGTGTAGTCGTTGGAGTG
GACCCCTATGGATCAATTCTGGCTCAGCCTGAAGAGTTAAATGAGAGTGATGTAATGGTG
GTGGAAGGTATTGGATATGATTTCTTGCCGAAGGCTCTAGACAGGACGGTCATTGACAAA
TGGGTGAAGACGGAAGACAAGACCTCACTGAACATGGCCAGGAGGTTGATCAAAGAGGAA
GGACTGCTATGCGGAGGTAGCAGCGGGTCCGCGATGTGGGGAGCCATCCAAGCGGCGAAA
TCTCTTAAAGCAGGTCAAAGATGTGTGGTTCTATTACCAGACAATATACGTAACTATATG
ACGAAATTCATCTCTGACCAGTGGATGGAGGCCCGCGGTTTCAAGCCATACGATAATAAC
GAAAAACTGTGGTAA
Protein sequence:
MLSEFSLPAPLWYVSRGAWGSRCRPARLVAWLLRRRLLLQLHTYVQFNSPHHANWPQHPL
AGYRCIIVLPEKMSDEKVNTLRALGAEIIRTPTEAASESPDSNIMVARRLSNEIPDAVLL
DQYNNVCNPLAHYDGTAEEILWSLENDVDMVVIGAGTCGTISGVAHKIKEKCPKCVVVGV
DPYGSILAQPEELNESDVMVVEGIGYDFLPKALDRTVIDKWVKTEDKTSLNMARRLIKEE
GLLCGGSSGSAMWGAIQAAKSLKAGQRCVVLLPDNIRNYMTKFISDQWMEARGFKPYDNN
EKLW