| New model in OGS2.0 | DPOGS212661 |
|---|---|
| Genomic Position | scaffold2337:+ 14466-15260 |
| See gene structure | |
| CDS Length | 795 |
| Paired RNAseq reads | 80 |
| Single RNAseq reads | 383 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000125 (3e-64) |
| Best Drosophila hit | CG3165 (3e-15) |
| Best Human hit | three prime repair exonuclease 1 isoform a (1e-20) |
| Best NR hit (blastp) | PREDICTED: similar to three prime repair exonuclease 1 [Tribolium castaneum] (2e-41) |
| Best NR hit (blastx) | PREDICTED: similar to three prime repair exonuclease 1 [Tribolium castaneum] (7e-41) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0003697 single-stranded DNA binding GO:0004527 exonuclease activity GO:0005622 intracellular GO:0032405 MutLalpha complex binding GO:0032407 MutSalpha complex binding GO:0032558 adenyl deoxyribonucleotide binding GO:0042803 protein homodimerization activity |
| InterPro families | IPR006055 Exonuclease IPR012337 Ribonuclease H-like IPR013520 Exonuclease, RNase T/DNA polymerase III |
| Orthology group | MCL11141 |
Nucleotide sequence:
ATGGGTATAAAAACATACGTGTTCTTTGATATCGAAACAACAGGATTACCGTATCAAGAG
AAAAACCACACTAAAATAACTGAACTTACATTTGTAGCAGTGTCACGAAATGATTTAGAA
AACGGTGATGGTCAAGCTGTACCGCCTACAAATAAATTATCCTTACTTTTTAATCCCCAG
AGACATATTTCAGAGAAGGTTTGTAACTTGACTGGCTTATCAAATAACTATTTAAAGAAT
CAAGCCATTTTTAAAGACAAAATAAAAATTATAAATTCGTTTTTGGAATTACCAAAGCCT
GTATGCCTTATAGCTCACAATGGCAACAGATTTGACTACAAAATATTACTCTCTGAGTAT
TTGGATGCCCAAGAAACTCTGCCATCAGATTTGTTATGTGTTGATTCTTTGTCCGGATTC
AGGCATGTTATGAAAAATATTGATATAGAGCAATGTAAAAACAAAAAAATATGTACTTCC
TATGATTATAATATAGAAGATACAAGCGATTGGCCAGAACTTGATATAAGCAATGAAGAT
TGGGACAAAATTGACAGTCTTGTCGCATCTTTTTCTGAAATGGCTTCACCAAAAACGGAT
AATAAAAAGATGTCTTACAGTTTGTCAAATCTGTATAAGGTTTTGTTAGGGAAGGAGCCA
GTTAATGCTCATAGAGCTGAAACCGATTGTGTGATGCTTTTGGAATGTGTGCTCGCTGTA
AAGGAAGATTTCTTATCCTGGGCCGATGCAAAATGTAAACCTATTAAGGAGATCAAACCA
TTGACAAGAATGTAG
Protein sequence:
MGIKTYVFFDIETTGLPYQEKNHTKITELTFVAVSRNDLENGDGQAVPPTNKLSLLFNPQ
RHISEKVCNLTGLSNNYLKNQAIFKDKIKIINSFLELPKPVCLIAHNGNRFDYKILLSEY
LDAQETLPSDLLCVDSLSGFRHVMKNIDIEQCKNKKICTSYDYNIEDTSDWPELDISNED
WDKIDSLVASFSEMASPKTDNKKMSYSLSNLYKVLLGKEPVNAHRAETDCVMLLECVLAV
KEDFLSWADAKCKPIKEIKPLTRM