New model in OGS2.0 | DPOGS204056  |
---|---|
Genomic Position | scaffold5177:- 622-1742 |
See gene structure | |
CDS Length | 564 |
Paired RNAseq reads   | 441 |
Single RNAseq reads   | 1663 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004865 (1e-15) |
Best Drosophila hit   | ND |
Best Human hit | apolipoprotein D precursor (2e-07) |
Best NR hit (blastp)   | bilin binding protein 1 [Papilio machaon] (9e-23) |
Best NR hit (blastx)   | Bombyrin [Bombyx mori] (3e-26) |
GeneOntology terms    | GO:0022626 cytosolic ribosome GO:0005576 extracellular region GO:0008289 lipid binding GO:0006810 transport GO:0005215 transporter activity GO:0005501 retinoid binding GO:0005488 binding GO:0005622 intracellular GO:0005783 endoplasmic reticulum GO:0030425 dendrite GO:0043025 neuronal cell body |
InterPro families    | IPR022271 Lipocalin, ApoD type IPR003057 Invertebrate colouration protein IPR012674 Calycin IPR011038 Calycin-like IPR000566 Lipocalin/cytosolic fatty-acid binding protein |
Orthology group | MCL18147 |
Nucleotide sequence:
ATGTACACCCTACTTCTGTTGACTTTATTTTCAACTGCTTACGCTAATGTCTTCTTCGAC
TCTAAGTGTCCAGAAGTCAAATCTGCGGAAAACTTTGAATTCTCTAAGTTCGGAAAAGGT
GACTGGTATGAAATTGCAAGATACCCTATTGATCTCGAAAAGGACTCCAAATGTGTAAAA
GTTATCTACACTTGGATGGACGACCACGCCATGGTGAAGTGTATCCTAATGGTAAACGAC
AAACAAGTGGAATTAAACGGTATCATGAGACCAGTGGTAAAGGCTGGAAACACTGAAAAA
CTTTTCTGTTCCGTATCTAACGAAAACGTAAAACTCGAGACAGATGTTTACATCTTGGAT
ATTGACTATGATAATTACGCTATTGCTTATGGCTGCAAATATGATGAAGAGAAGAAATCA
CGCCAAGACTTTGCTTGGATAATGTCTAGGAGCAACACTTTAAGTCCTGCCATCAAAGCT
AAAGTTGAGAACTTCGTGAAAGAATCTGAATTTCTTTACAACGATAAATTCTTCTGGCCT
GAAACCTCATGCGTAGCTAACTAA
Protein sequence:
MYTLLLLTLFSTAYANVFFDSKCPEVKSAENFEFSKFGKGDWYEIARYPIDLEKDSKCVK
VIYTWMDDHAMVKCILMVNDKQVELNGIMRPVVKAGNTEKLFCSVSNENVKLETDVYILD
IDYDNYAIAYGCKYDEEKKSRQDFAWIMSRSNTLSPAIKAKVENFVKESEFLYNDKFFWP
ETSCVAN