New model in OGS2.0 | DPOGS205176  |
---|---|
Genomic Position | scaffold347:+ 45222-61351 |
See gene structure | |
CDS Length | 1482 |
Paired RNAseq reads   | 56 |
Single RNAseq reads   | 172 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000871 (7e-178) |
Best Drosophila hit   | synaptotagmin beta, isoform D (7e-63) |
Best Human hit | synaptotagmin-5 (1e-25) |
Best NR hit (blastp)   | PREDICTED: similar to CG3020 CG3020-PA [Tribolium castaneum] (8e-134) |
Best NR hit (blastx)   | PREDICTED: similar to CG3020 CG3020-PA [Tribolium castaneum] (1e-96) |
GeneOntology terms    | GO:0005544 calcium-dependent phospholipid binding GO:0007269 neurotransmitter secretion GO:0008021 synaptic vesicle GO:0016079 synaptic vesicle exocytosis GO:0005215 transporter activity GO:0016020 membrane |
InterPro families    | IPR000008 C2 calcium-dependent membrane targeting IPR001565 Synaptotagmin IPR018029 C2 membrane targeting protein IPR008973 C2 calcium/lipid-binding domain, CaLB |
Orthology group | MCL17050 |
Nucleotide sequence:
ATGAGTGGTTTGGGGCCTCCTGGAGTGTGGGCCGCCCAAAAGAGACTGGAATCGTGGGCT
AGGGCGGCGAGGGAAAGGACTTCTAGCGCCAGCAGTGGCCAGAGTCATAATTCAACTGAC
AGTTTTGGCGAAGAGAAGTCCCATGGAAGTCCAAGCGAAATGCTTATACCTCGCGAGCAA
TGTCGCGTGCAGCCTCTGAGTGAGAGGTCCGCATCTTCTCTGCCCCACGCTCGTCTAGCC
AGGACACCTTCCATATCGTCCCAGAGCAGCCTCGACAGCGGTACATCAAGAGCGACTAGT
CACCGTGGTTCTTCGCCAGCAATTAGGACCTTCGCCCCGGACGGTCGTACGTTAGAAGCT
GGAGTATCTGGCATGCCCCGGTCTCCATCACCATTGAGGGCAGCGTCCCTGGATGTCAGA
GCAGCTCCCCTCGGCTCCTTGGCTTCTTTGGCTGATTCCCCAGCACCACCAAGCCCGAGA
CACATACCCCCTAGATGCCTTTCCCCCCTACTTATGCCGCCTCGACGAATAGACCGCAGC
AACTCCTTAGTAGAGAACAGCAGCGGAGCACCCTTGAGTCCCGGAGCTAGCACCGCGATT
AGTTCTTTAGGAGCCTTGCAACCAGATCTTTATACTAAAAGAGAAACTCCTTTGGTTATT
GAATTAGAGGGCGTCGGCCCCTCACTAGGAAGAATCCACTTACGCTTAAAGTACGACTTC
GATAGATCGGACCTCGAAGTTCACCTGATAGAAGCTCACGATCTGGCCGGCTATGAGGCT
GGAGGTTTTAATGATCCGTATGTAAGAGTGAGTTTGTTACCGGAAGTCGATACTCGAGTC
AGACAGACACCAGTCCACAGGAATGAAGCCAATCCCTTTTTTGACCAACACTTCAAGTTT
CCGGTATCACACGATGACCTCACTGACAAGACACTGCTGCTACAAGTGTTTGATTATGAC
AGGTTCTCTAGAAACGAAGTGATGGGCTCGGCCAAGGTCCCACTGTCACGTGTGGAGGTC
GCAGGTGGTGCGGAGGTTTGGGCAGAGCTTTCTCGCGAGCGTCGCCCGCCCGAAGAACTT
CAGGAACTGTTACTCTCTCTTTCTTTCCTACCCTCAGCTGAACGCCTCACCGTGGTAGTA
CTGAAGGCTAGAAATCTTCTTCCGCCTCAAGAAGGAAAAGATGCTTTGGATGTTTATGTC
AAAGTATACCTTCTGGTTAATGGTAAACGGGTAAAGAAGAAGAAGACTAACCGCAAGGAA
ATCAATAACCCCATATGGAATGAAGCTTTATCTTTTAGTCTTCCTTCAAGTAACTTACAA
GAAGCTTCTATTGAGGTATGTGTTGTAACTGGCGGTGGTAGCGGTCTGGTGGTGGGTTGG
TGCTGCGTGGGAGCCGCAGAACCAGCGGCTGAGGGCCGCCACTGGGCTCAAATGGCGCAA
GAGACACGAAAAGCCGTCGCCATGTGGCACACCCTCAGATAA
Protein sequence:
MSGLGPPGVWAAQKRLESWARAARERTSSASSGQSHNSTDSFGEEKSHGSPSEMLIPREQ
CRVQPLSERSASSLPHARLARTPSISSQSSLDSGTSRATSHRGSSPAIRTFAPDGRTLEA
GVSGMPRSPSPLRAASLDVRAAPLGSLASLADSPAPPSPRHIPPRCLSPLLMPPRRIDRS
NSLVENSSGAPLSPGASTAISSLGALQPDLYTKRETPLVIELEGVGPSLGRIHLRLKYDF
DRSDLEVHLIEAHDLAGYEAGGFNDPYVRVSLLPEVDTRVRQTPVHRNEANPFFDQHFKF
PVSHDDLTDKTLLLQVFDYDRFSRNEVMGSAKVPLSRVEVAGGAEVWAELSRERRPPEEL
QELLLSLSFLPSAERLTVVVLKARNLLPPQEGKDALDVYVKVYLLVNGKRVKKKKTNRKE
INNPIWNEALSFSLPSSNLQEASIEVCVVTGGGSGLVVGWCCVGAAEPAAEGRHWAQMAQ
ETRKAVAMWHTLR