New model in OGS2.0 | DPOGS215900  |
---|---|
Genomic Position | scaffold1978:+ 19837-20743 |
See gene structure | |
CDS Length | 798 |
Paired RNAseq reads   | 1715 |
Single RNAseq reads   | 9217 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000430 (2e-08) |
Best Drosophila hit   | cuticular protein 64Ab (1e-18) |
Best Human hit | ND |
Best NR hit (blastp)   | TPA: putative cuticle protein [Bombyx mori] (3e-51) |
Best NR hit (blastx)   | cuticular protein RR-2 motif 104 [Bombyx mori] (2e-36) |
GeneOntology terms    | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL19900 |
Nucleotide sequence:
ATGTTTACCAAAGTTCTGTGCTTGAGTGCTGTTCTGGCAGTGGCCACAGCAGGCCTTATC
GCTGAACCTCATTACTCCTCTGCTGCCGCAGTTTCTTCTCAAAGTATCGTTCGTCACGAT
CAACCTCATGCTGTAGCTGCCGCTCCAGTTGCAATCCACTCTGCTCCAGTTGCCATTCAC
TCTGCTCCTGTTGCCTACCATGCAGCACCAGTACACTATTCATCTGCCAGAGCTGTATCT
TCTCAGTCGATCCAACGTCACGACCAACAGCGTGCTGCTATTGCTGTTGCACCCGTAGCC
CACTACGCCGCTGCTCCAGTTGCTGTTCACTCTGCTCCTGTTGCTTACCACGTAGCACCA
GTACACTATTCATCTGCCGGAGCTGTATCTTCTCAGTCCATCCAACGTCATGACCAACCC
CGTGCTGCTATTGCAGTGGCTCCCGTAGCTCACTACTCAGCTGCTCCAGTCGCTCACTAC
GCAGCTGCCCCAGTAGCTCACTACTCTGCCCCTATCGCCCATGCTGCATATGCTGCCCAC
GAAGAAATCGACTCTCACCCTCAATACGACTTCTCTTACTCCGTACATGACGGACACACC
GGCGACAACAAGTCACAGCACGAGAGCCGCGACGGTGACGCAGTGCACGGCGAGTACTCC
CTGGTAGAGGCTGACGGATCTGTACGTACCGTTCAATACAGCGCTGATGATCACTCTGGC
TTCAACGCCGTCGTCAGCCACTCAGCTCCGTCAGCTCACGCCGTACCAGCACCAGCTCAT
GTGCTTGCTCACCATTAA
Protein sequence:
MFTKVLCLSAVLAVATAGLIAEPHYSSAAAVSSQSIVRHDQPHAVAAAPVAIHSAPVAIH
SAPVAYHAAPVHYSSARAVSSQSIQRHDQQRAAIAVAPVAHYAAAPVAVHSAPVAYHVAP
VHYSSAGAVSSQSIQRHDQPRAAIAVAPVAHYSAAPVAHYAAAPVAHYSAPIAHAAYAAH
EEIDSHPQYDFSYSVHDGHTGDNKSQHESRDGDAVHGEYSLVEADGSVRTVQYSADDHSG
FNAVVSHSAPSAHAVPAPAHVLAHH