| New model in OGS2.0 | DPOGS204924 |
|---|---|
| Genomic Position | scaffold1529:- 24503-29282 |
| See gene structure | |
| CDS Length | 1515 |
| Paired RNAseq reads | 296 |
| Single RNAseq reads | 621 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011417 (4e-10) |
| Best Drosophila hit | CG3045 (5e-98) |
| Best Human hit | tRNA pseudouridine synthase 3 (2e-78) |
| Best NR hit (blastp) | PREDICTED: similar to pseudouridylate synthase [Nasonia vitripennis] (4e-112) |
| Best NR hit (blastx) | PREDICTED: similar to pseudouridylate synthase [Nasonia vitripennis] (1e-108) |
| GeneOntology terms | GO:0004730 pseudouridylate synthase activity GO:0009982 pseudouridine synthase activity GO:0003723 RNA binding GO:0001522 pseudouridine synthesis |
| InterPro families | IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain IPR020103 Pseudouridine synthase, catalytic domain IPR020094 Pseudouridine synthase I, TruA, N-terminal IPR020095 Pseudouridine synthase I, TruA, C-terminal IPR001406 Pseudouridine synthase I, TruA |
| Orthology group | MCL14853 |
Nucleotide sequence:
ATGTCGAAACAAATTAATAAATTACCACCAAAACAGAGAAAAACTAAAGGCTTATCTAGA
GAGGAGCTTATGAATATGGATAAAAATGAATTAGTTGATAGAATAATACAGTTGGAAGCT
CACACTACGCAACTTAAAAATATAATAAGCAAAAGTGAACCAGTTACAGAGAATATACAG
GGTTACAATAATCAAAGAAAATTTGATTTCACGAAGTGTACCTTCCGACGGGTTCTGCTA
CATATAATATACTTCGGCTGGGATTACCACGGGCTGGCCGTCCAGGAGGATTCAACGCAC
ACAATTGAGCATTACCTCTTCAATGCCCTCGTCAAGTCATGTCTCATTGAGAGTAGAGAA
CAGTCACAGTACCATCGATGTGGAAGGACAGATAAAGGCGTCAGTGCCTTCGGACAGATA
ATATCTATATCATTACGGAGCAAACTGGAACCGTCTTCAACCGACTACTCATCCGAGATC
CAATACTGCAAGATCCTTAACAGATTGTTTCCGAGGGATATTAAAGCGGTAGCCTGGATG
CCCATCCCTGATGATAGACCAGATTTCAGTGCAAGATTCGACTGTAAGGGCCGGCAGTAC
AAGTACTATTTCCCGAAATCTAATCTCAATATAACCGCTATGAGGGAGGCCTGTCGCCAG
CTCATCGGTTCACACGACTTCCGCCACCTCTGCAAGATGGACGTGGGGAACGGCGTCACT
GAGTTCACAAGGCGTGTCGTATCAGCTGACATTATAGCTCTGGATAAGGATTGCGAACAG
ACAACATCGATGTACGCATTAGTGATAGAAGGTAATGCATTTCTGTGGCATCAGATCAGG
TGTATAATGGGCGTGTTGTTGCTCGTGGGCCAAGGACACGAGAGCCCGGGTATCATAGCC
GAATTACTGGACGTCGAAGCAAATCCACGCAAACCTCAATACAATATGGCTCTGGATTTG
CCGTTGAACCTGTTCTGCTGCAGATATGATGTGAAGAGCCGCTGGGTTTATGACGACGAG
GAGCTCAAATACATCATCACCAACTTACAGGCGGACTGGACCTTGTATAATGTCAAATCC
ACCATGATAAAAGATGCTCTGGAACATCTGGAAGGTGTCCTATATGACTTGAGCAAGGAG
GGGAAAAAGTGTGACAGAGACGGAGAATATAACGACGTGGGAAGGAGAGAGATGCAAGAT
AAGGAAGATGTAGCGTTAGAGGGAGACCAAGATAAAATATGTGACATAGACAGAAATTTA
GAAGAGTTGGGAGAGAAAGAGAAAGAAGATGATAACAATAAGTGCGAGAGAGACAGGGGA
TTAAAAGAGTTGGAAGGGAAAGAGACGGGAGATAGAATAATATCGCACGCAGAATGCCTG
CTACAAGGAGTCAAACCAAAAATATACACACCGCTGTTGAAAAGACAAACCTGCTCGAGT
CTGCAGGAACGATTGCAATACTACAGGAAGAAAAGGAAAGTGGAGAGCGGTTCTGATGAT
GAAGAAATAAAATAA
Protein sequence:
MSKQINKLPPKQRKTKGLSREELMNMDKNELVDRIIQLEAHTTQLKNIISKSEPVTENIQ
GYNNQRKFDFTKCTFRRVLLHIIYFGWDYHGLAVQEDSTHTIEHYLFNALVKSCLIESRE
QSQYHRCGRTDKGVSAFGQIISISLRSKLEPSSTDYSSEIQYCKILNRLFPRDIKAVAWM
PIPDDRPDFSARFDCKGRQYKYYFPKSNLNITAMREACRQLIGSHDFRHLCKMDVGNGVT
EFTRRVVSADIIALDKDCEQTTSMYALVIEGNAFLWHQIRCIMGVLLLVGQGHESPGIIA
ELLDVEANPRKPQYNMALDLPLNLFCCRYDVKSRWVYDDEELKYIITNLQADWTLYNVKS
TMIKDALEHLEGVLYDLSKEGKKCDRDGEYNDVGRREMQDKEDVALEGDQDKICDIDRNL
EELGEKEKEDDNNKCERDRGLKELEGKETGDRIISHAECLLQGVKPKIYTPLLKRQTCSS
LQERLQYYRKKRKVESGSDDEEIK