| New model in OGS2.0 | DPOGS202540 |
|---|---|
| Genomic Position | scaffold1426:- 3823-4773 |
| See gene structure | |
| CDS Length | 543 |
| Paired RNAseq reads | 381 |
| Single RNAseq reads | 1122 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000127 (7e-93) |
| Best Drosophila hit | CG7006 (1e-70) |
| Best Human hit | 60S ribosome subunit biogenesis protein NIP7 homolog isoform 1 (7e-71) |
| Best NR hit (blastp) | PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum] (2e-81) |
| Best NR hit (blastx) | PREDICTED: similar to nuclear import 7 homolog [Tribolium castaneum] (3e-78) |
| GeneOntology terms | GO:0005515 protein binding GO:0042255 ribosome assembly GO:0005634 nucleus GO:0003723 RNA binding GO:0042254 ribosome biogenesis |
| InterPro families | IPR005155 Ribosome biogenesis factor NIP7-like IPR002478 Pseudouridine synthase/archaeosine transglycosylase IPR015947 Pseudouridine synthase/archaeosine transglycosylase-like IPR016686 Ribosome biogenesis factor, NIP7 |
| Orthology group | MCL15737 |
Nucleotide sequence:
ATGAAGGTATTATCAGAGGACCGCACGAAGAAACTGTTCGAAAAATTGACAAAATATATC
GGAGTAAACGTTAAGCTTCTAATAGACCGACCGGACGGCACATACTGCTTCAGAGAAAAG
AAAGACAGGGTGTATTATATATCTGAGAAATTGTTACAACTAGCACAAACTGTGAAACCT
GAACATCTGATATCCGCTGGTACATGTTTTGGTAAATTCACTAAAACAAATAAGTTCCGG
TTGCATATAACGGCGTTGACATACATAGCGCCATATGCTACATACAAGATATGGGTTAAA
CCATCGGCAGAACAGCAGTTTTTGTACGGACATCATGTTATTAAAAGTGGACTTGGCAGA
ATAACGGAAAACACACCTAAACACCAAGGAGTTGTTATCAACACAATGTCGGATATACCA
ATAGGTTTTGGAGTCGCAGCTCGATCAACCACAGAATGTAGACACGCAGATCCCTTAGCA
ACAATCGCCTTCCACCAGGCCGACATCGGTGAATACATACGATCGGAAGATACTTTAGTT
TGA
Protein sequence:
MKVLSEDRTKKLFEKLTKYIGVNVKLLIDRPDGTYCFREKKDRVYYISEKLLQLAQTVKP
EHLISAGTCFGKFTKTNKFRLHITALTYIAPYATYKIWVKPSAEQQFLYGHHVIKSGLGR
ITENTPKHQGVVINTMSDIPIGFGVAARSTTECRHADPLATIAFHQADIGEYIRSEDTLV