New model in OGS2.0 | DPOGS202493  |
---|---|
Genomic Position | scaffold1426:+ 15506-23983 |
See gene structure | |
CDS Length | 1566 |
Paired RNAseq reads   | 1072 |
Single RNAseq reads   | 3902 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000097 (4e-134) |
Best Drosophila hit   | Calpain-B (4e-89) |
Best Human hit | calpain-9 isoform 2 (6e-73) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC002116 [Tribolium castaneum] (4e-102) |
Best NR hit (blastx)   | calpain-B [Apis mellifera] (1e-100) |
GeneOntology terms    | GO:0005509 calcium ion binding GO:0006508 proteolysis GO:0004198 calcium-dependent cysteine-type endopeptidase activity GO:0016020 membrane GO:0005737 cytoplasm GO:0016540 protein autoprocessing |
InterPro families    | IPR001300 Peptidase C2, calpain, catalytic domain IPR000169 Peptidase, cysteine peptidase active site IPR022684 Peptidase C2, calpain family |
Orthology group | MCL10179 |
Nucleotide sequence:
ATGGGGCAAAATGGCGGCGCTGATTTCGGCGCGCTATTGTCCGGGGCCGGTCGACAAATT
TTGAACCAAGGCGGTCAAGCATTGTTGAATTATGGAGCTCAGGCGCTTGGGAACATAATT
AACGAAGTGTTCCAAAAGAAAGAGGCCGAACATAAGAGAGTTTTACCGAGCATCAAAAAT
TATAAAGTGAATGTGATTGTACGAACGGCAGTTGAGGCTTTCAATAAACCTGAATCCATA
CCTAAAACAGATCGAGATGTTAAAAACGCTGGGTTTTTTGCGAAATTACTAAGGAAATCG
AATGTGTCGGATATCGATAAGACAAAAGGAAAACCTCTTTGGGCCAACAAAGTCGATTCA
GATGAAAGAATTGATATCGAGAAGCGAAAAATAGTATCGACTACAGACAGATCAAACATC
TCGAATAGATTTCATTTCGCCAAACCGGAAGTTACGTCGGAAGTTACATCGGAAGTTAAT
AACGATGAAATCAAAAATAAATCACCACGTAAAAAATCGATCGTCGTACCAAGTAGGGTA
AATCGATTCAAAACGCCAGCAAATTACAACGGCAGTCACATGTTCATGCCTACAGGCGAA
CGGTTGTTCTGGCTCGGTGAGACCCGTCCATCATCATTCGGTCCAGCCACGTACCAGGAT
TTCAAGGAGATCAGATCTCGCTGTCTCTCCGAAGGCAGGCTGTTCGAGGATCCGGAATTC
CCGGCCACCGATCGCAGTTTGTACTACAAGGAACGTCTGGATAGACCCTTAACATGGCTA
AGACCTGGGGAAATCAGCGAAGATCCGCAGCTATTCGTGGAGGGCTACAGTCGCTTCGAC
GTGCAACAGGGCGAGTTAGGAGACTGTTGGTTGCTGGCTGCCGTCGCCAATCTGACGCTC
CATAGAAAACTCTTCTTCCAAGTAGTGCCGGACGACCAGAGCTTCGATGAAGAATACGCT
GGTGTCTTCCACTTCCGGTTCTGGCAGTATGGTCGCTGGGTGGACGTTGTCGTCGACGAC
CGCCTGCCGACCTACCGCGGAAAACTGGTCTTTCTTCACTCATCAGAGAGAAATGAGTTT
TGGAGTGCCTTATTGGAGAAGGCCTATGCTAAACTCCACGGTTCCTATGAAGCCTTAAAG
GGAGGTTCTACCTGTGAAGCCATGGAAGATTTCACGGGCGGTGTGACCGAAATGTACGAA
ATGACGGAACTACCGCCCAACTTCTATACTATACTACTGAAAGCATACGAACGTAACTCA
CTCATGGGATGCAGTATTGAGGTAGGAAAAGGTTTTTTAAATAATTATTTTTCGTCGCAA
GAGTCTTTGCAGACTCGTCGTGGTCATCACGTATCAGTGATCCGTATACATGATGACTCA
TGGCAAGATAGTCGCAGTGGTTTCCCCTTGTCTTCTGCACCAGCACTTTTTTGGGGCTAT
TTAGACCCCAAGGCTTGCTGTAGCCTGTTCCAGCCAGTGGTATCTATATACTCTCAGAAA
GTACACATGACTCGGAAAAGATCACATTGGTACTTGCCAGGTTCGAACCCGCGCCCTCAC
GCATGA
Protein sequence:
MGQNGGADFGALLSGAGRQILNQGGQALLNYGAQALGNIINEVFQKKEAEHKRVLPSIKN
YKVNVIVRTAVEAFNKPESIPKTDRDVKNAGFFAKLLRKSNVSDIDKTKGKPLWANKVDS
DERIDIEKRKIVSTTDRSNISNRFHFAKPEVTSEVTSEVNNDEIKNKSPRKKSIVVPSRV
NRFKTPANYNGSHMFMPTGERLFWLGETRPSSFGPATYQDFKEIRSRCLSEGRLFEDPEF
PATDRSLYYKERLDRPLTWLRPGEISEDPQLFVEGYSRFDVQQGELGDCWLLAAVANLTL
HRKLFFQVVPDDQSFDEEYAGVFHFRFWQYGRWVDVVVDDRLPTYRGKLVFLHSSERNEF
WSALLEKAYAKLHGSYEALKGGSTCEAMEDFTGGVTEMYEMTELPPNFYTILLKAYERNS
LMGCSIEVGKGFLNNYFSSQESLQTRRGHHVSVIRIHDDSWQDSRSGFPLSSAPALFWGY
LDPKACCSLFQPVVSIYSQKVHMTRKRSHWYLPGSNPRPHA