DPGLEAN18032 in OGS1.0

New model in OGS2.0DPOGS210654 
Genomic Positionscaffold1872:+ 13104-19010
See gene structure
CDS Length1842
Paired RNAseq reads  934
Single RNAseq reads  2227
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA001799 (0.0)
Best Drosophila hit  abstrakt (0.0)
Best Human hitprobable ATP-dependent RNA helicase DDX41 (0.0)
Best NR hit (blastp)  PREDICTED: similar to ATP-dependent RNA helicase abstrakt (DEAD box protein abstrakt) isoform 1 [Apis mellifera] (0.0)
Best NR hit (blastx)  PREDICTED: similar to ATP-dependent RNA helicase abstrakt (DEAD box protein abstrakt) isoform 1 [Apis mellifera] (0.0)
GeneOntology terms












  
GO:0008026 ATP-dependent helicase activity
GO:0004004 ATP-dependent RNA helicase activity
GO:0004386 helicase activity
GO:0030010 establishment of cell polarity
GO:0007399 nervous system development
GO:0005634 nucleus
GO:0009653 anatomical structure morphogenesis
GO:0006915 apoptosis
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
GO:0008270 zinc ion binding
GO:0000398 nuclear mRNA splicing, via spliceosome
GO:0071011 precatalytic spliceosome
GO:0071013 catalytic step 2 spliceosome
InterPro families


  
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR001650 Helicase, C-terminal
IPR014001 DEAD-like helicase
IPR014014 RNA helicase, DEAD-box type, Q motif
Orthology groupMCL14334

Nucleotide sequence:

ATGTCGGAACCTCAAGTGAAACGATATAGAAGAGAAGAGAAATCGTCAGAATCTGAAGAA
GATATAGATAATTACGAGCCATACGTGCCTGTGAAAGATAGGAAAAAGCAGAAATTGTTG
GTGTTGGGTCGCCTTGGCCAGTTGGCTGCTGAGGCTGTAGCTGAAACCAAGAGCTCCAGC
GAGAACGACCCAGAAGACGAGGGATCACAGGAAGAATGGGGCAGACGTTACAATGTGTCA
TTGCTGGATCAACACAGTGAACTGAAGAGGTTGGCGGAGGCGAGGGCCCTCTCTGCAGCG
GAGAGACAGGCTAAGGAGGAAGAACATATACTTGATAGTGTAGCACAGAGCAAGGCTTTG
ATGGGAGTCGCTGAATTGGCTAAAGGTATTCAATACTCGGAACCTATAAAGACGTCGTGG
AAACCTCCTGGCTGTATCAGCTCCTTACCTCCAGAGCGTCACGAGAGGGTGAGGAGGGAG
CTGAGGATACAGGTGGAGGGTGAAAACGTCCCTCCACCTATAAGGACTTTCAGACATATG
AAATTTCCCAAAGGTATTCTCCAAGGTCTGGAGGCGAAGGGCATAAAGAAGCCCACGCCC
ATCCAAGTTCAAGGTATCCCAGCGGTTCTGAGCGGTCGTGACATGATCGGTATAGCCTTC
ACCGGCTCCGGGAAGACGCTGGTCTTCACGCTGCCCATCATCATGATGTGTCTGGAACAG
GAGATAGAGATGCCGTTCATCAGAAACGAAGGTCCCTACGGCCTCATAATATGCCCGTCC
AGGGAACTCGCCAAGCAGACCCATGATATCATAATGCATTTCGTTAAACATCTCAAAATG
GCGGGACATCCGGAGATAAGGAGCTGTCTGGCGATCGGTGGTGTGTCCGTCTCCGAGTGC
ATGGAGGTGGTGCAGCGAGGAGTTCACATCATGGTGGCTACACCTGGAAGATTAATGGAC
ATGCTGGATAAGAAGATGGTCCGACTGAACGTGTGCCGCTACCTGTGTATGGACGAAGCT
GATCGGATGATAGACATGGGCTTTGAAGAGGACGTGCGGACCATCTTCTCCTACTTCGCC
GGGCAGCGACAGACTTTACTGTTCAGCGCCACCATGCCCAAGAAGATACAGAACTTCGCC
AGGTCAGCGTTGGTCCAACCGGTGACGTTGAACGTGGGTCGCGCCGGGGCCGCGGCGCTC
GCGGTCCGCCAGGAGCTGGAGCCCGTGAAGGCCGAGGCGAGGACGGTCCACCTGCTGCAG
TGTCTCCAGAAAACGCCTCCTCCCGTCCTAGTGTTCGCTGAACGGAAACAGCACGTGGAC
GCTATACATGAGTACCTGCTGCTCAAGGGGGTGGAGGCCGTGGCGATACACGGCGGCAAG
GACCAGGAGGAGAGGTCCCGGGCCGTGGAGGCCTTCAGGAGGGGCGAGAAGGACGTGCTC
GTGGCTACCGATGTTGCCAGTAAAGGTCTCGACTTCGAGAACATCCAGCACGTGATCAAC
TACGACATGCCGGAGGATATCGAAAACTACGTCCACAGGATAGGTCGTACTGGGCGGGCG
GGGACACAGGGCGTAGCGAGCACATTACTAGGGCGGGCGGCGGATTCTAGCGTTCTACGA
GATTTGGCCCATTTACTGGTCGAAGCTGGGCAAAAAGTCCCGCAATTTCTTCTAGAGATG
ATCGGTGAGGACGGGCCCCTGTCCGGGGGACCTGGCTGCGCGTACTGCGGGGGCCTGGGA
CATAGGATCACTGAGTGCCCCAAGCTAGAGGCAGTCCAGAACAAGCAGGCCTCCAACATC
GGCAGGAGGGACTACCTCGCCAACACAGCAGCAGACTATTGA

Protein sequence:

MSEPQVKRYRREEKSSESEEDIDNYEPYVPVKDRKKQKLLVLGRLGQLAAEAVAETKSSS
ENDPEDEGSQEEWGRRYNVSLLDQHSELKRLAEARALSAAERQAKEEEHILDSVAQSKAL
MGVAELAKGIQYSEPIKTSWKPPGCISSLPPERHERVRRELRIQVEGENVPPPIRTFRHM
KFPKGILQGLEAKGIKKPTPIQVQGIPAVLSGRDMIGIAFTGSGKTLVFTLPIIMMCLEQ
EIEMPFIRNEGPYGLIICPSRELAKQTHDIIMHFVKHLKMAGHPEIRSCLAIGGVSVSEC
MEVVQRGVHIMVATPGRLMDMLDKKMVRLNVCRYLCMDEADRMIDMGFEEDVRTIFSYFA
GQRQTLLFSATMPKKIQNFARSALVQPVTLNVGRAGAAALAVRQELEPVKAEARTVHLLQ
CLQKTPPPVLVFAERKQHVDAIHEYLLLKGVEAVAIHGGKDQEERSRAVEAFRRGEKDVL
VATDVASKGLDFENIQHVINYDMPEDIENYVHRIGRTGRAGTQGVASTLLGRAADSSVLR
DLAHLLVEAGQKVPQFLLEMIGEDGPLSGGPGCAYCGGLGHRITECPKLEAVQNKQASNI
GRRDYLANTAADY