| New model in OGS2.0 | DPOGS200730 |
|---|---|
| Genomic Position | scaffold1707:- 16578-18191 |
| See gene structure | |
| CDS Length | 1614 |
| Paired RNAseq reads | 2072 |
| Single RNAseq reads | 5028 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001032 (0.0) |
| Best Drosophila hit | SH3PX1 (8e-131) |
| Best Human hit | sorting nexin-9 (8e-77) |
| Best NR hit (blastp) | sorting nexin-9 [Culex quinquefasciatus] (1e-140) |
| Best NR hit (blastx) | sorting nexin [Aedes aegypti] (2e-143) |
| GeneOntology terms | GO:0006886 intracellular protein transport GO:0035091 phosphoinositide binding GO:0007154 cell communication GO:0005515 protein binding |
| InterPro families | IPR019497 Sorting nexin protein, WASP-binding domain IPR001683 Phox homologous domain IPR001452 Src homology-3 domain |
| Orthology group | MCL11967 |
Nucleotide sequence:
ATGTCTATCACCTCTGGAGAAATACTGACACTTATAAATACAGATATAGGGGAAGGCTGG
TGGGAGGGGCGAAATTCCAGAGGTGAAACTGGTTTATTTCCTGCTGCATATGTGAGAAAA
GTAACACCAGATGAGTCTGCACCCACAAAAATGGCTCCTCCAGCACCAAGATACGATCAG
GCTGCAGATGATTGGGGAGATCACCAATACAGTGCTGGCGACAATAATTATCAAAGGGCG
GCTTCACATGACGAGGGCTGGGATGATGATTGGGAGGATGACACATATTCAGAAATTGGA
CCTGGCCCACAGCAATCAAAGCAGGCAGTGAATCAACCTCTTACACCATTACCGGGAATG
CCAATTAGTGATCTCAACCATCAGATGGACGACAACTCATCTACCTTTGGTTCATCAGTT
GGCACAGTGAGAAAAAATAAATTTGCACCATCATCTAAAGTCAGCGGTGAGAGTTACCTT
TTAGGTACTTTAAATGTTGAAGTACCAGATGCTGATAAAATATACATAGAACAAGAAGGG
GATGCATATATTTGGTCGCCCATACCACAACCATATAATGTAACTGTTGCATCACCAAAA
AAGGAATCCAAATTTAAGGGTATTAAGAGCTTCATAGCATATCAATTGACTCCCTCCTTT
AATAATATTCAAGTATCCAGAAGATATAAGCATTTTGACTGGCTTCATGAGAGATTGCAG
GAGAAATTTACACTCATCCCAATCCCACCTTTACCTGACAAACAGATCTCTGGAAGATAT
GACGAACAATTGATTGAGAGAAGAAGAGTTCAGTTACAGGAGTTTGTGGATTGGATGTGT
AAACATCCAGTACTATCCAGATCGGAGGTCTGGCAACATTTCCTAACTTGCACAGATGAG
AAACGTTGGAAGGCTGGTAAAAGACAAGCGGAGAGAGATAATTTATTAGGACTTAACTAC
TGTATATCATTAGTTGTACCTGAAAAAGCTTTACTTCAATCACAAGTAGACCACATCACG
GAACAATGCCACATTTTCATGAATAGCATGGATAGTTCTGTTAAATCTCTGACAAATATG
TGTATAGCACAAACAAAACGATTCCAAGGGCCTTATAAGAGCGATTGTCAAAAAGTAGGA
GAGGCTTTTTACAACTTAGGAAATGCACTAAGTTTAGATGAAGGCACAATAGTTTCTACT
TCAAAACTAACTTCAGCTATCAAAATGGCTGGCGGGGCCTACATTGAAATAGGCAGAATG
TATGAGGAACAACCAAAATATGATTTCGAACCACTCGGTGATAAATTTCATCTTTACAAA
GGTATAGTTGGCTCATTTCCTGATGTATTAGCAAATCACAAAGCAGCTGTGCAGAAGAAA
AAAGAGTGTGAGAGATTGAGAGCTGAAAATAAAATGGAAAGGGAACAATTAAATGAAGTG
TTTAGAAGAAATAATGTCATATCATATGCCCTTCTTGCCGAAATAAACCACTTCAAGTCG
GAGAGGACGGTCGATTTAAATGCAACAATGCAGAAATTTCTCAAGCAGCAAATAACATTT
TATAAGAAGATAGTTGATAAATTGGAAACAACACTACAACAGTTCCAAGAATAG
Protein sequence:
MSITSGEILTLINTDIGEGWWEGRNSRGETGLFPAAYVRKVTPDESAPTKMAPPAPRYDQ
AADDWGDHQYSAGDNNYQRAASHDEGWDDDWEDDTYSEIGPGPQQSKQAVNQPLTPLPGM
PISDLNHQMDDNSSTFGSSVGTVRKNKFAPSSKVSGESYLLGTLNVEVPDADKIYIEQEG
DAYIWSPIPQPYNVTVASPKKESKFKGIKSFIAYQLTPSFNNIQVSRRYKHFDWLHERLQ
EKFTLIPIPPLPDKQISGRYDEQLIERRRVQLQEFVDWMCKHPVLSRSEVWQHFLTCTDE
KRWKAGKRQAERDNLLGLNYCISLVVPEKALLQSQVDHITEQCHIFMNSMDSSVKSLTNM
CIAQTKRFQGPYKSDCQKVGEAFYNLGNALSLDEGTIVSTSKLTSAIKMAGGAYIEIGRM
YEEQPKYDFEPLGDKFHLYKGIVGSFPDVLANHKAAVQKKKECERLRAENKMEREQLNEV
FRRNNVISYALLAEINHFKSERTVDLNATMQKFLKQQITFYKKIVDKLETTLQQFQE