| New model in OGS2.0 | DPOGS201569 |
|---|---|
| Genomic Position | scaffold4612:+ 1203-10281 |
| See gene structure | |
| CDS Length | 1917 |
| Paired RNAseq reads | 103 |
| Single RNAseq reads | 297 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006117 (2e-99) |
| Best Drosophila hit | CG8419 (2e-40) |
| Best Human hit | tripartite motif-containing protein 45 isoform 1 (2e-35) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC013417 [Tribolium castaneum] (1e-91) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC013417 [Tribolium castaneum] (6e-66) |
| GeneOntology terms | GO:0005622 intracellular GO:0008270 zinc ion binding GO:0005515 protein binding |
| InterPro families | IPR017868 Filamin/ABP280 repeat-like IPR000315 Zinc finger, B-box IPR001841 Zinc finger, RING-type IPR001298 Filamin/ABP280 repeat IPR017907 Zinc finger, RING-type, conserved site IPR014756 Immunoglobulin E-set IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL16231 |
Nucleotide sequence:
ATGGAAGTAGACCGTATTTTATATATTTTCGGAAGCTTCTCCAGGAAGAAGAGGGAGAGA
AGGAAATCCCTGGAGCCATCGTCGATCAGCGCTGGGAATAGTCCTTTGAAAAGTAACTCC
AAGTCCAAACTGTCTCGGCCATCAAGTCAGAATGCTATCGCGCCTAGAACTTCTGCGTAT
GAGGAGAAGAGGAAGGCAAAACTGAAGGAATGGGAGTGTGGTATATGCAAGAGCGAGCTG
GTGGAACCCAGACTACTCGCGTGTCTTCATAGTTTCTGTACCGACTGTCTCTTGGGGCTA
CACTGTGAGGGGGATGATCTATGGGAGGATAACGAAGGATGTCCGGAACATGACGTTGGT
TTTGGCAGTGCATCAGCTGGAGGCTCCGGCGGCTCAGGCTACGAGACCCTGAGACATTCC
GTCTCTGAAAGTAGTCTGGAGAAAATTAAATATGGGATCGTTTCTAGGAAGGTATCCGGT
AAGAGCTATCATTTCGTGGTGTGTCCACTATGCGGTTCAGAAACTCAACTGCCTCTCGGT
GGAGTGTCAGCACTGTCGCTGAACTACGTGCTGCTGCGGAGGATGACGAGCAGAGATGGC
GACAGCGCTGTCCTCTGTGACCTCTGCTGTGCTGATAATAAGGCAGAGAGTCGCTGCAGC
CAATGTCTTGTAAGCGTGTGTACATCGTGCGGGGATTCCCACACCCTGAAAAAGGGAAAC
GCGACACATCTTCTGGAACCCCTGGCACCATTCCTAAGGTTCTGCGGACAACATCCGAAA
GTCGAGCTGACCGTTTACTGCGCTACTTGCCAGCAGGTGATTTGTCGCGATTGCAGTCTG
ATCTCCCACGGGGGACACGCTCTGGAGGGCGCGGGCAGGGCTGCGGCAGGGAAGGTGGCT
GCCCTCAGGGACGCCATGCAGAGGGCTGGACTTGTACCAGACCACGTACAACGAGCTAAC
AGAATACTGGACGTACACGCCAGGGATATTGATGAGCAAGCTTCCCGCGTGGAGTCCGAG
ATCCGCTTGTGGTCGGAGGAGTATCGCAGATCGTTAGAGACACACGCGAGGGCGCTGTGT
GCGGGGGCGGTGAGGGCGCGCGCTCGGTACAGAGCCAGAGCCACGAGACAGCTGCTACAG
TTGGAGCAGAGAGCTGAACATGCCAGGGAGGCTGTCAAGTTCGCAGAGGAGCTATTAAGT
GAGGGCAAGGAAGACGAGATCCTGTCCCTCAGCGGGCCGGTGCTGAAACGTCTCCAGAAC
CTCACGGAGCTGCAGCCTCTGTGCGAGGCGGCGCGGTGCGAGCTCCGGTTCGCCCCCAAC
GCGCCGGCCGCTCACAACCCCTCACTCGTCGGCAGGTTGTACACCATGGGACCAGACCCA
CAGCAATGTGTGCTTGATACTGACGGTCTACAAGATCTCCGAGTGGACTGCCAGCACACA
GCTATATTAGAGTTACGTGACAGCAACGGAGATCGTATCTGGTGCGGCGGCGAGACGGTT
TGTGGATATTTCCGTCGTCGGGACAGTTCGTCTCGGCCCGCCGCGGCTCGCGTGAGGCCG
CGTGTCGATGGTTCATACGCCCTGCATGTAGCACCTCGAACACCTGGACACTACCTGCTG
GCTGTCACAGTCGACAACCAGCCCATAAAGGGTAGTCCGTTCTCGTGTTCAGCTCGCCTG
TCCAAGTCCCACTCGGGACAGTTCCATTGCTGTTCGTTCTGTTCGTCGGGAGGTCGCCGG
GACGCCACTTGCGGCTGTGGATCCTCTATGGGCGGAGGTTATAAAGGCTGCGGTCACGGT
CACGCGGGCTGGCCGGGGACGAGACACTGGTCCTGCTGCGGAGGGACGTCCCGCCACGCG
CCATGTACCACCCGCACTACCAACGACACACCACACACATACCACGTGTCGCTCTGA
Protein sequence:
MEVDRILYIFGSFSRKKRERRKSLEPSSISAGNSPLKSNSKSKLSRPSSQNAIAPRTSAY
EEKRKAKLKEWECGICKSELVEPRLLACLHSFCTDCLLGLHCEGDDLWEDNEGCPEHDVG
FGSASAGGSGGSGYETLRHSVSESSLEKIKYGIVSRKVSGKSYHFVVCPLCGSETQLPLG
GVSALSLNYVLLRRMTSRDGDSAVLCDLCCADNKAESRCSQCLVSVCTSCGDSHTLKKGN
ATHLLEPLAPFLRFCGQHPKVELTVYCATCQQVICRDCSLISHGGHALEGAGRAAAGKVA
ALRDAMQRAGLVPDHVQRANRILDVHARDIDEQASRVESEIRLWSEEYRRSLETHARALC
AGAVRARARYRARATRQLLQLEQRAEHAREAVKFAEELLSEGKEDEILSLSGPVLKRLQN
LTELQPLCEAARCELRFAPNAPAAHNPSLVGRLYTMGPDPQQCVLDTDGLQDLRVDCQHT
AILELRDSNGDRIWCGGETVCGYFRRRDSSSRPAAARVRPRVDGSYALHVAPRTPGHYLL
AVTVDNQPIKGSPFSCSARLSKSHSGQFHCCSFCSSGGRRDATCGCGSSMGGGYKGCGHG
HAGWPGTRHWSCCGGTSRHAPCTTRTTNDTPHTYHVSL