| New model in OGS2.0 | DPOGS202614 |
|---|---|
| Genomic Position | scaffold870:+ 54759-60235 |
| See gene structure | |
| CDS Length | 2583 |
| Paired RNAseq reads | 171 |
| Single RNAseq reads | 464 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006348 (5e-71) |
| Best Drosophila hit | roundabout, isoform B (1e-81) |
| Best Human hit | roundabout homolog 2 isoform ROBO2b (2e-82) |
| Best NR hit (blastp) | PREDICTED: similar to roundabout 1 [Tribolium castaneum] (2e-93) |
| Best NR hit (blastx) | PREDICTED: similar to roundabout 1 [Tribolium castaneum] (4e-91) |
| GeneOntology terms | GO:0008046 axon guidance receptor activity GO:0048814 regulation of dendrite morphogenesis GO:0007411 axon guidance GO:0005515 protein binding GO:0001656 metanephros development GO:0030673 axolemma GO:0046982 protein heterodimerization activity |
| InterPro families | IPR007110 Immunoglobulin-like IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013098 Immunoglobulin I-set IPR013783 Immunoglobulin-like fold |
| Orthology group | MCL40081 |
Nucleotide sequence:
ATGGTCGCGAGAACAATTAAAAGAGATAAACGTGCATGGAACCAGTTTAAGTTTGTCCTT
TTGCATCTTTTGTTCACTTTTCATGCGACAAAAGCCCAAAGCCGGGCACCCAGGATAAAG
GAGCATCCATCAGATACAATAGTTGGTAGAAGTGAACCTGCAACCTTACGGTGTGTGGCT
GAAGGTAAACCCAAGCCCACAATCCAATGGTATAAGGATGGCGTTCCACTTGCACCAACC
GATCATCCCCATAGAGTTCTTCTTGAAGATGGACTATTATTTCTCAGGGTTATGCGTAGT
AAGAAGGAAAGCGACGATGGTGTATACTGGTGTGTCGCTCGTAACACCGTCGGGGAAGCG
GTTAGCAAGAACGCCACCTTAACAATTGCTGTCTTACGCGATGAGTTTAGAAATGAACCT
AGAGATGTTAAAGTAGCCAGTGGCGAAGCAGCGTTACTTGAATGCTCTGCTCCCCGAGGA
GTTCCTGAACCATCTGTTCATTGGACAAAAGATGGGCATAGTTTAGATATAGAAGTTAAT
GGAAGAGTCACTATTATAGATGGAGGTAGTTTGAAATTTTTAGAAACTATAGCTTCAGAT
AGCGGTGTATACAGATGTATTGCATCGAATGTTGCCGGAGAGAGGCAATCACGACCAGCG
ACATTACTCGTATTACGAAGACCACATTTTCTTGTGAAACCTAATAATATAACGGCTTTG
ATAGGACAGAACATCGAGTTTCATTGTCAAGCCTCACCCGAGTCAGATGTATCTGTAACG
TGGTCAAGGGATAGAGGTTCATTATCTCTGTATGCGATAATACGAAGGGGTTCGTTAAGA
ATAGATAGGGTAGTAGCGTCAGACGGAGGTACTTACACATGCCGAGCTGAGAGTCAAGCA
GGTTTTAGTGTTGCTACAGCAACCCTCACAGTACATTCTTTACCACAATTTACGAGGGTA
CCATCAGATCAAACTGCTTGGGAAGGCGAATCAGTTTCATTTCCCTGTGAAGCTGAAGGC
ACACCAAAACCTGTAGTATTTTGGACGATGGAAGGTTCTCAGGAATTAGTATTTCCAAAT
TCAGAACACGCTACCGGGTCTCTTTATTTAGATCGAGTCTCAACACAACATGCAGGCAGA
TTGACTTGCGTAGCAGTTAGTGCTGCAGGAAGCACTTTACATACTGCAACTCTACAGGTA
TTAAGACGAGAAGCAAATTCATTTAATAGTAACTCTGAATCGTCATCTCCATATCCTGAA
TTAAATAAACCACAAAATCATCCCCCCATGACTCAATATGAGCTTGTTCAGGCCCGTCGT
TATTTACAACAAGATGTCTTAGTTTTAAGAAGAGTCGAGGGGATATCTTCGACAACTTTG
AAAATAGTTTGGGATATCGAAGTACGAGTAGGCGCTGGTACCAACGGCCGAGTGGTAGGC
CAGATGTCACTAGGTGCTCGCACTCGGGCAGCGGCAGCTAGCTCCCTGCGAGCCGGTGGG
CGGTATAGCGCTCGAGCTGCCGCTGTCACGCGCCGCGGTCACGGGCCTTTTAGTGCCCCT
GCGCATATACACATGCTTCCCACGCACTCACCGAGACATTATGTTCAAACTGAACCTGCG
ACCGACAAGGCGATATTATCAATGTTTCAGGAAACTTGGTTATTAGTGTTAAGCATAATC
ATATTAGCGATAATAGTTACAGGTGCCAGTGTTTTTATTTATTTACGACGGAGACAAATA
AAACAAAGGAAAAATCATAACTCAGCTGGTACACCCATAACGAACACCCAATGTTTGCTA
GGTAAAGAAGCGGTTTGGCTTCGCGAGAGACCTTTATACGAAGACTCAACCGAACCCCGA
ATAGAAATATTAAACTGTCACCAAAGCTTATTACACAGCGGTCATACAATTGGCACAATG
GCCATGGAAGCTGAATATAGTCTTCCACAACACACAAGTGCCTTAAATATGATGGCACAA
GAAGATACGAGACGACACGCTCCAGAACCTTATGCGTCTAGCGCTATTTATACTGAATTA
CACTATCAGGACCATACAGACGCGGAGGATTCATGCATAAAGTGTGCTGTTAGTCCAGAA
TCTTACGACAATAGTATGGTTAGATCGTTTGCAGACAGTAATCAATATTCCAATGAAGAA
TGTTCCACGTGTTGTCGTAGTAGTAGTTCAACATTGACTAAAGATTACAGTGATATGACG
AAATGTGGAAACGAAGTTGATGACGTACAAGATTTATCTTTAGATGAATGTCCATCTTGT
AAGACAACACAGTCAAGATCATCTAGTCACCATGAAGGTAACAAAGAATGGACGGCTATA
GCTGATGTTGAGTACGACTATCCTCAATGGCAATGGTTAGGAAGAGAAAACAGCTTTAGA
CAAATGACCCAAAATTCTAAACATTCGAGTCAAAGTCGACGAAGCGACCAAAACTGTAGA
ATGAATTTATGTGATATTCTACCACCGCCTCCATACGAAAGGGAAACAACGTACAGGGAA
ATGCATGCATTTACTAACAATTCTGGAGCGTCCGGTTGTTCTGGACATTCGTACCGAAGT
TAG
Protein sequence:
MVARTIKRDKRAWNQFKFVLLHLLFTFHATKAQSRAPRIKEHPSDTIVGRSEPATLRCVA
EGKPKPTIQWYKDGVPLAPTDHPHRVLLEDGLLFLRVMRSKKESDDGVYWCVARNTVGEA
VSKNATLTIAVLRDEFRNEPRDVKVASGEAALLECSAPRGVPEPSVHWTKDGHSLDIEVN
GRVTIIDGGSLKFLETIASDSGVYRCIASNVAGERQSRPATLLVLRRPHFLVKPNNITAL
IGQNIEFHCQASPESDVSVTWSRDRGSLSLYAIIRRGSLRIDRVVASDGGTYTCRAESQA
GFSVATATLTVHSLPQFTRVPSDQTAWEGESVSFPCEAEGTPKPVVFWTMEGSQELVFPN
SEHATGSLYLDRVSTQHAGRLTCVAVSAAGSTLHTATLQVLRREANSFNSNSESSSPYPE
LNKPQNHPPMTQYELVQARRYLQQDVLVLRRVEGISSTTLKIVWDIEVRVGAGTNGRVVG
QMSLGARTRAAAASSLRAGGRYSARAAAVTRRGHGPFSAPAHIHMLPTHSPRHYVQTEPA
TDKAILSMFQETWLLVLSIIILAIIVTGASVFIYLRRRQIKQRKNHNSAGTPITNTQCLL
GKEAVWLRERPLYEDSTEPRIEILNCHQSLLHSGHTIGTMAMEAEYSLPQHTSALNMMAQ
EDTRRHAPEPYASSAIYTELHYQDHTDAEDSCIKCAVSPESYDNSMVRSFADSNQYSNEE
CSTCCRSSSSTLTKDYSDMTKCGNEVDDVQDLSLDECPSCKTTQSRSSSHHEGNKEWTAI
ADVEYDYPQWQWLGRENSFRQMTQNSKHSSQSRRSDQNCRMNLCDILPPPPYERETTYRE
MHAFTNNSGASGCSGHSYRS