New model in OGS2.0 | DPOGS205470  |
---|---|
Genomic Position | scaffold3919:+ 8637-10809 |
See gene structure | |
CDS Length | 1401 |
Paired RNAseq reads   | 148 |
Single RNAseq reads   | 389 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008429 (1e-20) |
Best Drosophila hit   | CG6654 (2e-48) |
Best Human hit | zinc finger protein 180 (4e-54) |
Best NR hit (blastp)   | PREDICTED: similar to novel KRAB box and zinc finger, C2H2 type domain containing protein [Tribolium castaneum] (1e-65) |
Best NR hit (blastx)   | PREDICTED: similar to novel KRAB box and zinc finger, C2H2 type domain containing protein [Tribolium castaneum] (2e-72) |
GeneOntology terms    | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | ND |
Nucleotide sequence:
ATGTTCGGTATATTTATGGAAATAAATTCTACCAGTGCTGCACATATTTTGGCTACTTGC
ACTAATATAAATATCACTAAAGACGATTTGTTACCGAAGCAGATATGTTTCCATTGCTAC
AATTGTCTTGTAAGTTTTTATAAGTTTAGAAAACTAGCAGAAAGTATTGATGAGAAACTT
CAGAGTGCTTTGTATAACAGATTATACAGCAGTTCAAGTGAGGATAATAAATTAGGTGAA
ATAAAAATAGAGCATGTTAATTACATTGATGGCGATATTCAACCAAAGGTAGAGGATAGA
AGTGAGACTGAATCAAATTATAATAATAATACTAATAAAGACATTAAATGTAATATAAAG
GCAAATGAAACAACAACACAGTCAAGTGAAGTCAATAAAAGATTATTACCGACGGTATCA
AAGACTGAAAGCAAGGATGCAGCACATGATACAGATAATGTTAAATTCAAGTGTGAGATC
TGTAGTAGAACATTCAAATCAATTAAATCCCTCTCCGCACATATGATCAAGCATACTAAG
AAAGGCAGAATATTATCATGTAGTATATGCGGCAAGGAATTCAAAAAAGTCAGTCATGTT
AAAAGACATGAAAAAATACATGAAATCAATCGGCCACACAAATGTGCTGTCTGTTCTAAA
TCATTTCCTAGCGAGGACATATTGAAAGAGCATTTAAACAAACACAATGGTGTAAAACCA
CATACATGCACATATTGTTCAAAGTCGTTTGCACATTTATTTACTCTGAAAGCACATATA
AGGGTGCACACAATCGACAAGGCCTTCTTGTGTCCGACATGCGGAAAAAGCTTCTATTCG
AGCACAAATTTTAAACAGCATATGAAAAGGCATGCTGGCTTGAAGACGTTTGCATGTGCA
ATGTGTCCAAAGATATTTATAAGTAAAGGTGAATTAAAATCCCATACCATAACACATACA
GGTGAGAGGAATTGTACGTGTGATCAGTGTGGGTCGTCCTTCACTAAGAACAGTTCTTTG
ACGAAACATATCAAGTTGAAGCATTTGGGATTGAAGCCTCATCAATGTGATAAGTGTTCT
ATGAAATTCACAACCAAGGATCATTTGAAACGGCACTATAGAAGTCACACGGGTGAAAAG
CCTTATAAATGTGATCTGTGCGAAAGAGCTTTCTCACAAAGCAACGACCTCGTCAAACAT
CGTCGTGTGCATTTGGGAGATAAAACTTATAAATGCATGGAGTGTACTCAAAGTTTTCGC
CTCAAATATGAACTACAGCAACATATTTCGGAGCATTTTATTAATTTAAAATTGTTCAAC
AATCCACCAATAGATGGCGCTAGTTCCGTGATGGTTCCAGCTAATATTACAGATGGCGCT
GATGTTAAAATTAATAAATGA
Protein sequence:
MFGIFMEINSTSAAHILATCTNINITKDDLLPKQICFHCYNCLVSFYKFRKLAESIDEKL
QSALYNRLYSSSSEDNKLGEIKIEHVNYIDGDIQPKVEDRSETESNYNNNTNKDIKCNIK
ANETTTQSSEVNKRLLPTVSKTESKDAAHDTDNVKFKCEICSRTFKSIKSLSAHMIKHTK
KGRILSCSICGKEFKKVSHVKRHEKIHEINRPHKCAVCSKSFPSEDILKEHLNKHNGVKP
HTCTYCSKSFAHLFTLKAHIRVHTIDKAFLCPTCGKSFYSSTNFKQHMKRHAGLKTFACA
MCPKIFISKGELKSHTITHTGERNCTCDQCGSSFTKNSSLTKHIKLKHLGLKPHQCDKCS
MKFTTKDHLKRHYRSHTGEKPYKCDLCERAFSQSNDLVKHRRVHLGDKTYKCMECTQSFR
LKYELQQHISEHFINLKLFNNPPIDGASSVMVPANITDGADVKINK