| New model in OGS2.0 | DPOGS213249 |
|---|---|
| Genomic Position | scaffold2379:- 20402-27324 |
| See gene structure | |
| CDS Length | 2862 |
| Paired RNAseq reads | 467 |
| Single RNAseq reads | 1307 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009442 (1e-16) |
| Best Drosophila hit | roundabout, isoform A (1e-28) |
| Best Human hit | PREDICTED: hemicentin-2-like (6e-62) |
| Best NR hit (blastp) | PREDICTED: hemicentin 1 [Rattus norvegicus] (1e-88) |
| Best NR hit (blastx) | PREDICTED: hemicentin 1 [Bos taurus] (4e-90) |
| GeneOntology terms | GO:0005021 vascular endothelial growth factor receptor activity GO:0005509 calcium ion binding GO:0005515 protein binding GO:0005524 ATP binding GO:0005576 extracellular region GO:0005604 basement membrane GO:0005887 integral to plasma membrane GO:0005938 cell cortex GO:0006468 protein amino acid phosphorylation GO:0008218 bioluminescence GO:0018298 protein-chromophore linkage GO:0030054 cell junction |
| InterPro families | IPR002035 von Willebrand factor, type A IPR007110 Immunoglobulin-like IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013098 Immunoglobulin I-set IPR013783 Immunoglobulin-like fold |
| Orthology group | ND |
Nucleotide sequence:
ATGGTCTTATTCGGTTTTACAAACGGGCATAACGCGAAAAGCAGCCTCACATTCGTTATA
GATGATACGGGATCTATGTGGAATGATATTGATCAGGTAAAAGAGAAGACAAACGAAGTG
TTCGATGCAGTGCTCAATTCTAACGCATCAAAAATAGACGATTTCGTGCTTGTCACCTTT
AATGATCCAGATGCAAAAGTCTGCACAGTGACCCGAGATCGCAAAGAATTTAAAAAGGCT
CTTTCCGATATTACTGTAGACGGTGGTGGAGATTGTCCTGAGTACTCAATGAAAGGAATC
CAACTTGCGTTAGAGCACAGTAAACCGAATTCGTTGTTTTATGTTTTCACGGACGCAGCG
TCAAAGGATTACGAAGAGTACGAAAAAATTAAGAGCTTAGGGCTCAAGAAGTCTATTCAG
GTCACATTTTTACTGACCGGCGAATGTACGAACACTCCAGAAGAGGCATTTACTGTTTAT
GATAAATTAGCGGAAACTACTTCAGGACAGGTTTTCCACTTAGACAAACAGGATGTGAGC
AAAATAATAGACTATATCATAGCAACGATAAAAAACAAAAAGACGACTGTGGCCCAAAAA
ACTTTTTATAACGGTTACGGCAATGAGTTCAAATTTTCTATAGACAGCAAATTATGGGAT
GTAATGATTTCTGTATCAGCTGACGATCCGAGATTTCACTTGAATGGTCCTGATGGGGAA
TCAGTAGATGTTAAAGAATTCATCAGTACAAAGAAATCCAGTATATCTAAATTGGATGTT
AAACCGGGGATATACACTATGGTCCTGGATAATATTGGTCAAACCTCAGTGGTTATAACT
GGATCCACATATGTTTGTTTTCAACATGGCTTCTCTACTGTCATGCCTAGCACATTGAAC
GAAACGTCTACTAAACCTATCGAAGATACACCATCTTATTTAGCTATTGAATTGGATAAT
GTTAACAGAGATGTTATATTAGACACAGTAGAAATTAGAGATATTAATGATAATATCTTA
AGTGCTTATCCATTGGACCTGCTAAATAAGGACAGTCAATTCTACGTAACAAAACCAATT
CTGACACCTGATTCTACCTTCAAAATCGCAATAAATGGTCACACAAGCACTGAAGAGAAA
ATAACTAGAATTGCACCAACGGCTATTGAGCATCAAAAACCTGATTTAGAAGGACCAAAG
CGAAAAGCACCGATGGTCACAATTTTAGAAGGAAGTATCACAACTGTTGAATACGATTCA
AATTTATCCCTAAAATGCAAAGTGCACGCTTTTCCTAAACCGGATATTGTGTGGAAAGAT
GACTCAGGAATGATCTGGCCATCAAAAGTAGTCCCTGTGGATTTGCCTTATGATTATATG
GGTATTCTGGATAAAGATAAAATAAATAAAAATATAACTTTATATTGTACAGCGAAAAAT
GAAATCGGTGAAGATAAAAAATCTATTTTAGTTGAAACTAAAAGAAATTATTTCCTGGAA
ATTCTCGAAAGTCCCAAAGATTTGGTTATTGAGTATGGAAGTTCTAGTGTTCTTAATTTC
AAAGTGAATGCATATCCAGCAGCAACAATAGGGTGGTATAAAAAGAGGAAAGAACTTTTT
AATGACGATGATTACGAAATATCTGCAGATGGTTCCACACTAAAAATAAAATACATGCAT
CAAAGTTTAAGAGGATTTTATTCAGTGAAGGCTATGAATGAAGAAGAAAAAAAGATAATT
TACTTCAAAATAGATATGTCTGGAGAAAAGCCTGAAATAGACAAGACTGTCAGTTCTTAC
AGAATAGAGAAAGGATCTAGTGCCAATTTAACGTGCAGAATCCTAAAAGGTAAACCAGAG
CCTGAAATTTCTTGGACTTTTCAAAATGAATCTCCAGGTTCTTTAAAGCGTTTAGATGTT
GTTGGCGATCTTTATATTGATAAGGTTGGTCCAGAGAATATGGGAATATACACCTGCAAA
GCTCGAAATGAATTTGGAAAGGATCGTCACGATATTGACTTGTTCGTTGGATATGTCCCA
ACAATCAAGAATGTTCAAACTGAGGTTTTAGTGCCGGAGGGTCAACAAGTCATATTGACT
TGTATAGTCGACGGCTCTCCTTACCCTTTCGTTCGTTGGCTACTAAATGATGTTGAAGTA
ACAAGAACAGGAAAATATTCATTCAATGACAATAGACTAAGTTTTACAGGTTCAATTGAC
GATAGCGGCATATACACCTGTGAAGCTTCAAACAGTTTAGGACGAACGCAAAAAGACTAC
GATGTCGATATTTATATTCCAGTAAAAATGCAGGTGCCAAAAGACACAACTTTAAAATTA
GATGTTGGAAGTTCTACGACATTGCCATGCGTCGCTGAAGGTTATCCAAAACCAAACATC
AGATGGACTTATTACAGCAAAAATCCTAGCATTCGTCCTAAGACATTGAAATTTGATGAT
ACCGGCTCATATAACTTAGAACATATTCAAATAGAAGATGAAGGTTTCTATAGGTGCTCA
GCAAGTAACGTCGGAGGATTAAGTAGTGTTACCTACGAAGTTTTTGTCAGAGCCCCTGTA
TCTATTACGAATCCAGATGGAGTTGTTTTTAACGCTGTAAAGGGAGACCTGGCGCTTAGG
ATCCCCTGTAATGCCATTGGCAGCCCGAAACCTAAAGTAACATGGATGGCAAATGGTGAA
CACATTGCTTCAGGGACTGATTGGTACGACATAGAAGATGATGGCACTTTGGTTATTAAA
TATGTAACATTAAATTCTGGGGGAAACTATATTTGTGAAGCCCGAAATTATTTCAGTTCA
GACATTAAGGAATTTAATGTAAATGTAAAAGGCAAGTACTAG
Protein sequence:
MVLFGFTNGHNAKSSLTFVIDDTGSMWNDIDQVKEKTNEVFDAVLNSNASKIDDFVLVTF
NDPDAKVCTVTRDRKEFKKALSDITVDGGGDCPEYSMKGIQLALEHSKPNSLFYVFTDAA
SKDYEEYEKIKSLGLKKSIQVTFLLTGECTNTPEEAFTVYDKLAETTSGQVFHLDKQDVS
KIIDYIIATIKNKKTTVAQKTFYNGYGNEFKFSIDSKLWDVMISVSADDPRFHLNGPDGE
SVDVKEFISTKKSSISKLDVKPGIYTMVLDNIGQTSVVITGSTYVCFQHGFSTVMPSTLN
ETSTKPIEDTPSYLAIELDNVNRDVILDTVEIRDINDNILSAYPLDLLNKDSQFYVTKPI
LTPDSTFKIAINGHTSTEEKITRIAPTAIEHQKPDLEGPKRKAPMVTILEGSITTVEYDS
NLSLKCKVHAFPKPDIVWKDDSGMIWPSKVVPVDLPYDYMGILDKDKINKNITLYCTAKN
EIGEDKKSILVETKRNYFLEILESPKDLVIEYGSSSVLNFKVNAYPAATIGWYKKRKELF
NDDDYEISADGSTLKIKYMHQSLRGFYSVKAMNEEEKKIIYFKIDMSGEKPEIDKTVSSY
RIEKGSSANLTCRILKGKPEPEISWTFQNESPGSLKRLDVVGDLYIDKVGPENMGIYTCK
ARNEFGKDRHDIDLFVGYVPTIKNVQTEVLVPEGQQVILTCIVDGSPYPFVRWLLNDVEV
TRTGKYSFNDNRLSFTGSIDDSGIYTCEASNSLGRTQKDYDVDIYIPVKMQVPKDTTLKL
DVGSSTTLPCVAEGYPKPNIRWTYYSKNPSIRPKTLKFDDTGSYNLEHIQIEDEGFYRCS
ASNVGGLSSVTYEVFVRAPVSITNPDGVVFNAVKGDLALRIPCNAIGSPKPKVTWMANGE
HIASGTDWYDIEDDGTLVIKYVTLNSGGNYICEARNYFSSDIKEFNVNVKGKY