| Genomic Position | scaffold2379:- 16122-19774 |
|---|---|
| See gene structure | |
| CDS Length | 2358 |
| Paired RNAseq reads | 641 |
| Single RNAseq reads | 2247 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009441 (2e-22) |
| Best Drosophila hit | CG14120 (2e-16) |
| Best Human hit | contactin-5 isoform short (4e-06) |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (6e-157) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-144) |
| GeneOntology terms | GO:0046872 metal ion binding GO:0003676 nucleic acid binding GO:0016787 hydrolase activity |
| InterPro families | IPR007110 Immunoglobulin-like IPR000477 Reverse transcriptase IPR003598 Immunoglobulin subtype 2 IPR001604 DNA/RNA non-specific endonuclease IPR013098 Immunoglobulin I-set IPR013783 Immunoglobulin-like fold IPR020821 Extracellular Endonuclease, subunit A |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGTACCGCGATTCCGTTTCAATGGTTAGGACTGCTGTTGGCGATACAAAACCCTTTCCG
ATCTCAGTAGGGGTTCACCAAGGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTG
GACACTGTCTCGGCTAACATCCAGGACCAGCCTCCATGGCTGATGATGTATGCCGATGAC
ATAGCGCTCATTGATGAGAGCAGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGT
ACGCTTGAGAACGGTGGTCTTAAACTAAATGTGACGAAGACCGAGTACATGGCTTGCGGA
AGCCCGGACTCTTGCACTATCCATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTC
AGGTACCTTGGATCTATTCTGCATGAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGG
ATCAGCGCTGCTTGGGCGAAATGGCGTGAGGTCACAGGTGTGGTCTGCGACCGCAGAATA
CCGCCCAAGCTCAAGGGACTAATATACAAGAGCATAATCCGACCGGTTCTCTTATATGGA
AGCGAATGTTGGCCAACACTGTCCAGGCACACTCAGGAGCTTCACGTCACGGAGATGAAG
ATGCTGAGGTGGATGTGTGGCGTAACGCAGGCTGACCGTATACGTAACACATTTATCCGA
GGTAGTCTTGGAGTCCGTGACGTAGCGGATAAGCTTCAAGAGAGTCGCCTGAGATGGTAT
GGCCACGTTGCACGCCGGCCTGAGAACTACGTCGGAAAAATTTGCCTTGATATGACGGTC
CCTGGAGCAAAACCCCCAGGACGCCCAAGAAAGCGATGGCTGGACACCGTGAAGCAGGAT
ATGAGAGCCAATGGACTTACCACCGCGGATGCTAAAGACCGTGCAAATTGCCGTGTTAGT
ACGTTTTTATCAGCTCACACTGCACATAAAAAGGTGACTGTAGGTTATAAGCCAAGATTT
CTCAGTGACGAAGAAACTGTTATAGAATATTCGGAAGGCGATTTCTCTTATATGGACTGC
AATGCCGATGGCTATCCAAAGCCAAGCACGCAATGGATACGTAATGGTGATCCTGTACCT
ATAAATGGGTCGTATCTAATTATAGAAATGAAACTTGAAGATATCGGATACTACCAATGT
ACCGTAAGCAATGATCTTGGTTCAATTAGACGTACTTTTAAAATTAATTCAGGAGAATGC
CTGCTGCGTACTAAGCATGATTTTAATGATCAGCAGCCTTTACTTTTGACTCTATCCAGA
GACTGGCCAGAATTTAGAACATCAAATGAATATGTCCATATACCAATTTATAAATATTTT
CTTCTATCATGCCCCGGCAGTTCTGTAATTTACAATGGAGAAACATTCGGTCAAAACGTC
AAAACGAAGTGTTCAGAACTAAAAGACAAAATTGAAATAAAAAACAGAATCATTGATTAT
GATAAATTAAAATGTACCAAAAAAATAAAACCTCTAACAAAGCGAACAGGAATAAGCTGT
TTTGAACAACACGGAAACAACACAGAATTATTGCAAATTGGTTTTTTTTCACGAAGTAAG
TTTTTGAAGGTATACGACGTTTGTTTAGATCACGAACAGAAGATACCTCTCTTTGCAAAA
CAAACCTCAAATAAAGGTATCGCCCTGAATGCACCCCCCGGAGATTACACATTTGTTGAA
AGTAAATATTTGCCCTTTCATTTTGGGGACATGTATGACTGTGATTCTCAGTTGAGATTT
ATTTCATCGTCGATCGGAAAATCAATAAAACCAGTTAAAGATGTTGAATGCTGTTTTACA
AAAAGACAATTGATCAATCCTCGAGATGTTTTGCCGGGATTATCACAAGTGGCTGTATAT
AGCTATTTAAATGTTATACCTCATTGGAGTACCTGTGGAACTAAAAACTGGGATGAACTT
GAACTAAGAGTACGATATCTGGGAAAATATTCATCTAATGAGCTGACCATTTTCACTGGA
GCATCAGATCCGATGATGTTGCCAGGACAGACAGAAGATGCTTATGTGTCCTTAAGAGAC
AGATTAAACAGACGTCAACCAGTGCCCATGTATTTATGGAAGATAATTCAAAACCCGGCA
GATAATTCTTCCTTAGCTGTCATCCAACTAAATATTCCTAATGTTACGTCAGCGGAGGCC
TATTCTTATATGCCATGTAACGATATATGTCCCGAAGTCGAGTGGTTGCGTAATAACGAT
TGGCAGGATGTGAATAAGGGATTCACATTCTGTTGCAGTATTAGTGATTTTAATTCACGT
TTCGGCAAGCTTTTTGACGGATGTGAAAAAGTATTCAAGACTTTACCACCTTTATTACCT
GATTTTTCTCTTATCTAA
Protein sequence:
MYRDSVSMVRTAVGDTKPFPISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADD
IALIDESRLTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKF
RYLGSILHESGGIDHDVQARISAAWAKWREVTGVVCDRRIPPKLKGLIYKSIIRPVLLYG
SECWPTLSRHTQELHVTEMKMLRWMCGVTQADRIRNTFIRGSLGVRDVADKLQESRLRWY
GHVARRPENYVGKICLDMTVPGAKPPGRPRKRWLDTVKQDMRANGLTTADAKDRANCRVS
TFLSAHTAHKKVTVGYKPRFLSDEETVIEYSEGDFSYMDCNADGYPKPSTQWIRNGDPVP
INGSYLIIEMKLEDIGYYQCTVSNDLGSIRRTFKINSGECLLRTKHDFNDQQPLLLTLSR
DWPEFRTSNEYVHIPIYKYFLLSCPGSSVIYNGETFGQNVKTKCSELKDKIEIKNRIIDY
DKLKCTKKIKPLTKRTGISCFEQHGNNTELLQIGFFSRSKFLKVYDVCLDHEQKIPLFAK
QTSNKGIALNAPPGDYTFVESKYLPFHFGDMYDCDSQLRFISSSIGKSIKPVKDVECCFT
KRQLINPRDVLPGLSQVAVYSYLNVIPHWSTCGTKNWDELELRVRYLGKYSSNELTIFTG
ASDPMMLPGQTEDAYVSLRDRLNRRQPVPMYLWKIIQNPADNSSLAVIQLNIPNVTSAEA
YSYMPCNDICPEVEWLRNNDWQDVNKGFTFCCSISDFNSRFGKLFDGCEKVFKTLPPLLP
DFSLI