| New model in OGS2.0 | DPOGS202826 |
|---|---|
| Genomic Position | scaffold4203:+ 2391-11743 |
| See gene structure | |
| CDS Length | 1473 |
| Paired RNAseq reads | 1360 |
| Single RNAseq reads | 5438 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010476 (4e-143) |
| Best Drosophila hit | croquemort, isoform B (3e-65) |
| Best Human hit | scavenger receptor class B member 1 isoform 2 (4e-41) |
| Best NR hit (blastp) | scavenger receptor class B member 3 [Bombyx mori] (8e-149) |
| Best NR hit (blastx) | scavenger receptor class B member 3 [Bombyx mori] (5e-146) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0006909 phagocytosis GO:0006915 apoptosis GO:0005887 integral to plasma membrane GO:0006911 phagocytosis, engulfment GO:0006952 defense response GO:0006955 immune response GO:0048102 autophagic cell death GO:0042116 macrophage activation GO:0050764 regulation of phagocytosis GO:0035071 salivary gland cell autophagic cell death GO:0007155 cell adhesion GO:0016020 membrane GO:0002433 phagocytosis triggered by activation of immune response cell surface activating receptor |
| InterPro families | IPR002159 CD36 antigen |
| Orthology group | MCL16096 |
Nucleotide sequence:
ATGGTGTCCATGGAGAAGAAGAGTGCCATCCTCATGAGCGTCGGCTCCTTCCTGGTGGTG
ACCGGGGCTGTCATGGCCGTTTTCTGGCCATCTTTATTCATGTTAGTGTTGAAGAAGATT
ATGGTGCTGGCACCTGGTTCCACTTCTTACAACATCTGGAAGGAGATACCCATACCTATG
TACCTGGAGTTCTTTATGTTCAACATCAGCAACGTCGATGACATCCTAGCTGGGAAGAAT
GTGAAGATGCAGGTGGAGCAGTTCGGACCATACGTGTTTAGAGAGTACCATAAAAAGGTC
AACATCACATTCAACGACAACGCGACTGTCACCTTCTACAACGAACGAACATGGTTCTAC
GAGCCTGAAATGTCGAATGGGACCCTGGATGACGTCATCACCAGCATTAACCCGATTATA
GCGACGGTGGCCTACGTCCTCCGCAACCAGCATCCATTACTGAAGGTGCCCGTGGATGTG
TTCATGAGAATGTTCCATGACAACATGTTCCTGACAGCACCGGTCAGGAATTGGCTGTTC
GATGGTATAGAGGATCCTGTGCTGGACGTTGCAAATCATTTCCCTGATCTACCCATCAAT
ATACCCTACGATAGATTCGGCTGGTTTTATGAGCGCAACGGGTCAAAGGAATTCGATGGC
ATATTCCTCATGAACACTGGCGCTAAAGACTTCTCCTCTCTGGGTAACGTGGAGAAATGG
AAGTATTCTGACCGATCCAACTTTAGGGACGAATGCGGTGTGGTCCAAGGATCGACGGGA
GAGTTGTGGGCCCCTGAACTTGGACAGCAGGAGCTCACAGTATTCGCCCCGGATATATGC
ACGTACATGAATCTCGCGAGAACCGACAATCCGGTCGAGGTCCTGGGCGTCCAAGGTGTC
GAGTACGCAGCAAATAATTCATTATTCGACAACGGCTACAGATATCCTAGTAAGATAATG
GCAATCTTACAAATTAGCGGAGAAAAGAAAATATCAAAAATGTATGGTGTCCCTTTAATA
TTATTTTTTGTTGTTGGAGATTTAATCCTTATGGTTCTTGAAGGCATTAGTAACGGTGGC
ATTCTATCCTGTTTCCTGTCTTTCCTCCCCAGCGACATGAACTTCCGGCTGTCCTTGGAG
ATGTACACCGGCATGCCGTTGTCTGTCGCGGCTCAGCTACAGATCAACCTGCTAGTGAGA
CACGTCGATGCCATCACTATAAACAACCAGCTTCCCGACCGGGACACGCTGGTGCCCATG
TTCTGGTTCCGCCAAGAGTTGTTCATGACGGAGCAATACGCCAGCCTCGCGAGGCTCGCG
CTGGGGGTCCGCTCCGGCGTGCCGATTGGACTATACACTATCACGGTAGCGGTCGGCATC
CTGCTGCTCGTTATAGGTATCTTCATCCTCCTCAAGAAACTGCTCAAGCCTTCCGACACC
TTGCTGGACTCGCCGCACGAGGTGGTGCAGTGA
Protein sequence:
MVSMEKKSAILMSVGSFLVVTGAVMAVFWPSLFMLVLKKIMVLAPGSTSYNIWKEIPIPM
YLEFFMFNISNVDDILAGKNVKMQVEQFGPYVFREYHKKVNITFNDNATVTFYNERTWFY
EPEMSNGTLDDVITSINPIIATVAYVLRNQHPLLKVPVDVFMRMFHDNMFLTAPVRNWLF
DGIEDPVLDVANHFPDLPINIPYDRFGWFYERNGSKEFDGIFLMNTGAKDFSSLGNVEKW
KYSDRSNFRDECGVVQGSTGELWAPELGQQELTVFAPDICTYMNLARTDNPVEVLGVQGV
EYAANNSLFDNGYRYPSKIMAILQISGEKKISKMYGVPLILFFVVGDLILMVLEGISNGG
ILSCFLSFLPSDMNFRLSLEMYTGMPLSVAAQLQINLLVRHVDAITINNQLPDRDTLVPM
FWFRQELFMTEQYASLARLALGVRSGVPIGLYTITVAVGILLLVIGIFILLKKLLKPSDT
LLDSPHEVVQ