New model in OGS2.0 | DPOGS202826  |
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Genomic Position | scaffold4203:+ 2391-11743 |
See gene structure | |
CDS Length | 1473 |
Paired RNAseq reads   | 1360 |
Single RNAseq reads   | 5438 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010476 (4e-143) |
Best Drosophila hit   | croquemort, isoform B (3e-65) |
Best Human hit | scavenger receptor class B member 1 isoform 2 (4e-41) |
Best NR hit (blastp)   | scavenger receptor class B member 3 [Bombyx mori] (8e-149) |
Best NR hit (blastx)   | scavenger receptor class B member 3 [Bombyx mori] (5e-146) |
GeneOntology terms    | GO:0005044 scavenger receptor activity GO:0006909 phagocytosis GO:0006915 apoptosis GO:0005887 integral to plasma membrane GO:0006911 phagocytosis, engulfment GO:0006952 defense response GO:0006955 immune response GO:0048102 autophagic cell death GO:0042116 macrophage activation GO:0050764 regulation of phagocytosis GO:0035071 salivary gland cell autophagic cell death GO:0007155 cell adhesion GO:0016020 membrane GO:0002433 phagocytosis triggered by activation of immune response cell surface activating receptor |
InterPro families   | IPR002159 CD36 antigen |
Orthology group | MCL16096 |
Nucleotide sequence:
ATGGTGTCCATGGAGAAGAAGAGTGCCATCCTCATGAGCGTCGGCTCCTTCCTGGTGGTG
ACCGGGGCTGTCATGGCCGTTTTCTGGCCATCTTTATTCATGTTAGTGTTGAAGAAGATT
ATGGTGCTGGCACCTGGTTCCACTTCTTACAACATCTGGAAGGAGATACCCATACCTATG
TACCTGGAGTTCTTTATGTTCAACATCAGCAACGTCGATGACATCCTAGCTGGGAAGAAT
GTGAAGATGCAGGTGGAGCAGTTCGGACCATACGTGTTTAGAGAGTACCATAAAAAGGTC
AACATCACATTCAACGACAACGCGACTGTCACCTTCTACAACGAACGAACATGGTTCTAC
GAGCCTGAAATGTCGAATGGGACCCTGGATGACGTCATCACCAGCATTAACCCGATTATA
GCGACGGTGGCCTACGTCCTCCGCAACCAGCATCCATTACTGAAGGTGCCCGTGGATGTG
TTCATGAGAATGTTCCATGACAACATGTTCCTGACAGCACCGGTCAGGAATTGGCTGTTC
GATGGTATAGAGGATCCTGTGCTGGACGTTGCAAATCATTTCCCTGATCTACCCATCAAT
ATACCCTACGATAGATTCGGCTGGTTTTATGAGCGCAACGGGTCAAAGGAATTCGATGGC
ATATTCCTCATGAACACTGGCGCTAAAGACTTCTCCTCTCTGGGTAACGTGGAGAAATGG
AAGTATTCTGACCGATCCAACTTTAGGGACGAATGCGGTGTGGTCCAAGGATCGACGGGA
GAGTTGTGGGCCCCTGAACTTGGACAGCAGGAGCTCACAGTATTCGCCCCGGATATATGC
ACGTACATGAATCTCGCGAGAACCGACAATCCGGTCGAGGTCCTGGGCGTCCAAGGTGTC
GAGTACGCAGCAAATAATTCATTATTCGACAACGGCTACAGATATCCTAGTAAGATAATG
GCAATCTTACAAATTAGCGGAGAAAAGAAAATATCAAAAATGTATGGTGTCCCTTTAATA
TTATTTTTTGTTGTTGGAGATTTAATCCTTATGGTTCTTGAAGGCATTAGTAACGGTGGC
ATTCTATCCTGTTTCCTGTCTTTCCTCCCCAGCGACATGAACTTCCGGCTGTCCTTGGAG
ATGTACACCGGCATGCCGTTGTCTGTCGCGGCTCAGCTACAGATCAACCTGCTAGTGAGA
CACGTCGATGCCATCACTATAAACAACCAGCTTCCCGACCGGGACACGCTGGTGCCCATG
TTCTGGTTCCGCCAAGAGTTGTTCATGACGGAGCAATACGCCAGCCTCGCGAGGCTCGCG
CTGGGGGTCCGCTCCGGCGTGCCGATTGGACTATACACTATCACGGTAGCGGTCGGCATC
CTGCTGCTCGTTATAGGTATCTTCATCCTCCTCAAGAAACTGCTCAAGCCTTCCGACACC
TTGCTGGACTCGCCGCACGAGGTGGTGCAGTGA
Protein sequence:
MVSMEKKSAILMSVGSFLVVTGAVMAVFWPSLFMLVLKKIMVLAPGSTSYNIWKEIPIPM
YLEFFMFNISNVDDILAGKNVKMQVEQFGPYVFREYHKKVNITFNDNATVTFYNERTWFY
EPEMSNGTLDDVITSINPIIATVAYVLRNQHPLLKVPVDVFMRMFHDNMFLTAPVRNWLF
DGIEDPVLDVANHFPDLPINIPYDRFGWFYERNGSKEFDGIFLMNTGAKDFSSLGNVEKW
KYSDRSNFRDECGVVQGSTGELWAPELGQQELTVFAPDICTYMNLARTDNPVEVLGVQGV
EYAANNSLFDNGYRYPSKIMAILQISGEKKISKMYGVPLILFFVVGDLILMVLEGISNGG
ILSCFLSFLPSDMNFRLSLEMYTGMPLSVAAQLQINLLVRHVDAITINNQLPDRDTLVPM
FWFRQELFMTEQYASLARLALGVRSGVPIGLYTITVAVGILLLVIGIFILLKKLLKPSDT
LLDSPHEVVQ