| New model in OGS2.0 | DPOGS214532 |
|---|---|
| Genomic Position | scaffold2250:- 54105-55412 |
| See gene structure | |
| CDS Length | 1026 |
| Paired RNAseq reads | 143 |
| Single RNAseq reads | 715 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014563 (4e-144) |
| Best Drosophila hit | CG2982 (2e-43) |
| Best Human hit | lysine-specific demethylase NO66 (6e-49) |
| Best NR hit (blastp) | PREDICTED: similar to RIKEN cDNA 2410016O06, partial [Apis mellifera] (3e-66) |
| Best NR hit (blastx) | PREDICTED: similar to RIKEN cDNA 2410016O06, partial [Apis mellifera] (7e-63) |
| GeneOntology terms | GO:0005506 iron ion binding GO:0005634 nucleus GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors GO:0032453 histone demethylase activity (H3-K4 specific) GO:0034720 histone H3-K4 demethylation GO:0045892 negative regulation of transcription, DNA-dependent GO:0051864 histone demethylase activity (H3-K36 specific) GO:0070544 histone H3-K36 demethylation |
| InterPro families | IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase IPR013109 Cupin 4 IPR022777 Cupin, JmjC-type |
| Orthology group | MCL11538 |
Nucleotide sequence:
ATGCTCACACCATTTGATCCTAATGAATTTCTTAAAGAAATATGGGAGAAGAAACCTTTG
CATATTGCTCGGAAGAAACCCGACTACTACAAAGATGTAATCTCAACTCCAGTTATTGAT
AACATGCTGAGGACAGAAAATATTCAATTTACAAAGAATATTGATATTACATCATATGTA
GACGGCAAACGAGAAACTCACAACCCTGAAGGTCGGGCTAATCCACACCTCAGTGAAATT
GGGGAACCAGTTTTGGAAGTCGTTTTAGAAGCTGGTGACATGTTATATTTCCCGAGAGGC
TACATCCATCAAGGGGTGACAATTGATGGTGAACACTCACTTCATGTTACAATCAGCATG
TATCAAAAGCATGCCTGGGCAGATCTGCTTGAAAAAATGATTCCAGCGGCTCTACAAATT
GCCATAAATGAAAATATAGAATTCAGGGAAGGTTTGCCTCTCGATATTTACGATCATTTT
GGTTTGGTCCACTCCGATACTAACACTCCGCGAAAAGCAGAAATGGAAGAGATTGTAAAG
AGACTATTTAACAAGATCAAAGATTACTTACCAATAGATGAAGCTGTCGATCAGATGAAT
AAAAAATTCCAACAAGATGCATTACCTCCCGTCTTAAGCGATTTCGAAAAAGCTGTCACT
GTATTTGGTGACTCTGATGTTATGATAGAAAACGGTAAAGTTACCAACAGAGTTGAAATC
GGTCTCGACACAAGGATAAGACTACTCCGTAAGAATATTCTAAGAATTGTTTCCGAGGAA
CGTATCAAGTTGTATTATTATGCTGAAAACGCTTTAGAATATCATGGAGCTGAGCTGCCG
TTCCTGGAAATCGAAGAAGATTTGGCCCCAGCTATCGAAACCCTCATAACCACATACCCT
GAATATGTTTCTGTTGAGAACCTTGATATTCCAAGTGATTCTGATAAGATTCAAATATCA
GATGCTTTATGGAGTCGGGGTCTCATCATGACCGAATATCCTCTGGAAACTATTGACGAT
GAATAA
Protein sequence:
MLTPFDPNEFLKEIWEKKPLHIARKKPDYYKDVISTPVIDNMLRTENIQFTKNIDITSYV
DGKRETHNPEGRANPHLSEIGEPVLEVVLEAGDMLYFPRGYIHQGVTIDGEHSLHVTISM
YQKHAWADLLEKMIPAALQIAINENIEFREGLPLDIYDHFGLVHSDTNTPRKAEMEEIVK
RLFNKIKDYLPIDEAVDQMNKKFQQDALPPVLSDFEKAVTVFGDSDVMIENGKVTNRVEI
GLDTRIRLLRKNILRIVSEERIKLYYYAENALEYHGAELPFLEIEEDLAPAIETLITTYP
EYVSVENLDIPSDSDKIQISDALWSRGLIMTEYPLETIDDE