| New model in OGS2.0 | DPOGS211721 |
|---|---|
| Genomic Position | scaffold6728:- 579-1747 |
| See gene structure | |
| CDS Length | 474 |
| Paired RNAseq reads | 42 |
| Single RNAseq reads | 238 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013918 (4e-83) |
| Best Drosophila hit | mediator complex subunit 20 (4e-41) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 20 (1e-29) |
| Best NR hit (blastp) | mediator complex subunit, putative [Pediculus humanus corporis] (3e-60) |
| Best NR hit (blastx) | mediator complex subunit, putative [Pediculus humanus corporis] (2e-57) |
| GeneOntology terms | GO:0016455 RNA polymerase II transcription mediator activity GO:0006367 transcription initiation from RNA polymerase II promoter GO:0016592 mediator complex GO:0003713 transcription coactivator activity GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0006350 transcription GO:0003899 DNA-directed RNA polymerase activity GO:0005634 nucleus |
| InterPro families | IPR013921 Mediator complex, subunit Med20 |
| Orthology group | MCL15485 |
Nucleotide sequence:
ATGGGTTCAACAAAGACAGTACATATTTTACATAATTCAGAACAACCAGCATCTGTATTT
TCAATACTTGAGAGTGGTACAAAGAATATTCATGTAATCGCCGATGGACTATTTGATCTG
CTCATGATGAAGCTTTCACAACATTACACATCCAAGAAACAAACCAAGATAGAAAGCAAA
GGTCCCAAGTTTGAACTCGGAGATTTCTGCATTAAACTCGGCTCTGTTACAATGAATCAG
AATTTTAAAGGCATACTTATAGAGGTAGAATATCGTCCCTGTGTCATGGCGAATGCCGTG
TGGGGATTATTACGGGAGTTCCTACAGGGAATTCTTGGTTCAACGATAACCGTTCAGCCT
CCGCAGCACTTACTGAGTAGAATGAATGAGATATACACACCGATTGACACTATATATCAA
TATTTAGAACATTTTAGCGCCTACCGGAAAACTACTGGGTTAAGAAGTGCATAG
Protein sequence:
MGSTKTVHILHNSEQPASVFSILESGTKNIHVIADGLFDLLMMKLSQHYTSKKQTKIESK
GPKFELGDFCIKLGSVTMNQNFKGILIEVEYRPCVMANAVWGLLREFLQGILGSTITVQP
PQHLLSRMNEIYTPIDTIYQYLEHFSAYRKTTGLRSA