| New model in OGS2.0 | DPOGS207978 |
|---|---|
| Genomic Position | scaffold3857:+ 804-3583 |
| See gene structure | |
| CDS Length | 1056 |
| Paired RNAseq reads | 118 |
| Single RNAseq reads | 360 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000329 (3e-32) |
| Best Drosophila hit | cuticular protein 49Ab (5e-24) |
| Best Human hit | ND |
| Best NR hit (blastp) | larval cuticle protein LCP-30 precursor [Bombyx mori] (8e-44) |
| Best NR hit (blastx) | larval cuticle protein LCP-30 precursor [Bombyx mori] (1e-43) |
| GeneOntology terms | GO:0005214 structural constituent of chitin-based cuticle |
| InterPro families | IPR000618 Insect cuticle protein |
| Orthology group | ND |
Nucleotide sequence:
ATGCGTTGCTTAGTGATCCTCTGCATGGTGGCTTCGGCTGCCTGGGCAGCTGAAGACATA
TCAGTTGATTCTGTTGCTGAATCAAGTCCAAGCCCTTCCGTTAGTCCTTCAGTAAGTCCT
TCGGCAAATCCTTCCACTATTCAACCCGCGAGTCCAAGCCCTAGTCCCACACCATTCCCA
ATTAGCCGCGCTATTGCTACAGCGACAGCGTATAACCCTTACCGGTACAACGCTGCTAGG
GTTACGACCCCTCGTAATGATCCCGGACGCTATAACCCCGGGCGTTATGATCCTGGACGT
TATGACCCCGGACGCTACGACCCCGGTCGCTACGACCCTGGTCGCTACAACCCAGGAAAG
TACGACAGCTCAGGACGCTACATTCCGGACCCCAGCGGTGCCTACAATGGAGACCGTGGT
GACAGAGGTGGTGCGGGAGGCAAATATTCCGGCTCTTCTGATAGGGGAGGTCCAGGTGGA
GCATACTCTGGTTCTTCTGACAGAGGAGGTCCAGGTGGTGCATACTCCGGCTCTTCCGAT
AAAGGCGATGCTGGTTCTTATGTACCTGATAAATCAGGAGTTTACAATGGTGACCGTGGC
GATCGTGGTCAAGCTGGCGGATTTTATTCAGGTTCTGGAGACAAGGGTGGGGGTAAACCT
GCGGGTGAAAACGTAAGTCCAAGTCCTGCAGTGTCTCCTGCTTCAGTTTCTGCTGCAGCT
GCCGTAGCGAGTAGTCCGGTGGTAGTTAAGCCTACACCAGCCTATGTAGCCCCTGTTATT
CCCAAAGTGAATCCCAACTCTGGCGACTTCAACTATAAATACTCTATTATCCGACAAGAA
ACCGACGTTTTCCCCGATGGTTATCACTACTTGTATGAGACTGAAAATACAATCCTTGCG
GAGGAAGCCGGAAAGATTGAAAAAATTGACGGTGAATCTGAAGGTATGAGGGCTAAAGGA
TTCTTTCAGTATGTTGGACCTGATGGTGTAACCTATAGAGTTGACTATACTGCCGATGAA
AGAGGTTTTCTACCTAGCGGAGCTCATCTGCCGTAA
Protein sequence:
MRCLVILCMVASAAWAAEDISVDSVAESSPSPSVSPSVSPSANPSTIQPASPSPSPTPFP
ISRAIATATAYNPYRYNAARVTTPRNDPGRYNPGRYDPGRYDPGRYDPGRYDPGRYNPGK
YDSSGRYIPDPSGAYNGDRGDRGGAGGKYSGSSDRGGPGGAYSGSSDRGGPGGAYSGSSD
KGDAGSYVPDKSGVYNGDRGDRGQAGGFYSGSGDKGGGKPAGENVSPSPAVSPASVSAAA
AVASSPVVVKPTPAYVAPVIPKVNPNSGDFNYKYSIIRQETDVFPDGYHYLYETENTILA
EEAGKIEKIDGESEGMRAKGFFQYVGPDGVTYRVDYTADERGFLPSGAHLP