New model in OGS2.0 | DPOGS207980  |
---|---|
Genomic Position | scaffold3857:+ 23579-25099 |
See gene structure | |
CDS Length | 606 |
Paired RNAseq reads   | 60 |
Single RNAseq reads   | 214 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000331 (1e-28) |
Best Drosophila hit   | cuticular protein 49Ab (1e-12) |
Best Human hit | ND |
Best NR hit (blastp)   | cuticular protein RR-1 motif 40 [Bombyx mori] (4e-36) |
Best NR hit (blastx)   | cuticular protein RR-1 motif 40 [Bombyx mori] (3e-29) |
GeneOntology terms   | GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL39429 |
Nucleotide sequence:
ATGAAGGGAGCACTGGTGATACTTCTAGTCATAGGGCTTGTCAATTTAATAAAAGCCGAT
GATGGCAAATATCGGCCCGAGGTAAATGGTGACAAAAGCGGTAAATACTTAGCTTCAAAT
GACGGAAGATACTACGACTACAACAGATACAAGAATTATTTAGGACCAAACAGATTTTAC
TATCAAAATGCTTTCCAACCTCAATATTATCAACCTTACCAACAACTTGCTATGCCATTC
GCTACATTAAAGAAAGACGCCAGTGCGGCTGTCCCCGTTGTTAATAATCCTCAACCCGTC
GTAGTAACGACGGCGCGTCCCGTTTTGTCCACCGCAGCACCGATTCACATATATCCAAAA
AGTTACGGAAATGAAGGTTATGCTAGAATCTTAGAACAAGACAGCGATTCTAACGAACAC
AGCTACCAGTACAAATACAGGACTGAAAATGGTATAAATGCTGGAGAAACTGGAGAAATA
AGCCCATCTGGCGGCACCAGAGTCCGAGGATTTTACGAATATGTTGGAAGCGATGGTCTT
ACTTACCGAGTAGACTACACTGCTGATGAAAATGGCTTCCGTCCCTCAGGTGCTCATCTT
GTTTGA
Protein sequence:
MKGALVILLVIGLVNLIKADDGKYRPEVNGDKSGKYLASNDGRYYDYNRYKNYLGPNRFY
YQNAFQPQYYQPYQQLAMPFATLKKDASAAVPVVNNPQPVVVTTARPVLSTAAPIHIYPK
SYGNEGYARILEQDSDSNEHSYQYKYRTENGINAGETGEISPSGGTRVRGFYEYVGSDGL
TYRVDYTADENGFRPSGAHLV