| New model in OGS2.0 | DPOGS202204 |
|---|---|
| Genomic Position | scaffold8135:- 358-3666 |
| See gene structure | |
| CDS Length | 1842 |
| Paired RNAseq reads | 2482 |
| Single RNAseq reads | 6350 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013498 (0.0) |
| Best Drosophila hit | CG6370 (1e-55) |
| Best Human hit | dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform 1 precursor (1e-19) |
| Best NR hit (blastp) | PREDICTED: similar to ribophorin ii [Nasonia vitripennis] (4e-98) |
| Best NR hit (blastx) | PREDICTED: similar to ribophorin ii [Nasonia vitripennis] (6e-81) |
| GeneOntology terms | GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity GO:0008250 oligosaccharyltransferase complex GO:0018279 protein amino acid N-linked glycosylation via asparagine |
| InterPro families | IPR008814 Ribophorin II |
| Orthology group | MCL12076 |
Nucleotide sequence:
ATGAATAAATTAGCCCAACTTTTTATAGTTTTAAGTATATTAGCAGTCAGTAATGCTATA
TTACAAGGTATTATAAATGTCAAACACTTTCAATCCCTGCTAGAGGAAGGAATTAAAAGT
AAAGATATCAGTACTTTGTATCACTCTATCAAGGGTCTGAAACAACTTAATGTGAAACTT
CCTAACCTCTGTGAGGACATCAAAAATTCCAAATATGACATCAAGAACATAGAACATGTA
TTCTATCTGACGAATGCTGCCGAACTCACCGGTTGTCAAAATTTCCTATTGCCCGATGTC
CTGGGTACTCCGGCAAAGGTGCTTAATAACAAAGATGTAACTATACCAGAGATATATTAT
GCCGTGTATTCCTTGAAAGCTATCGGTAGAGGCTCCGTGTACGACAGAGAGGATGGTTTG
AAAAATTTAATCCAAATGCTGAAAAAGGATGACTCTCCGGCTAACTATGGCTATGTATTT
GGTTTGTGCGAGCACATGGGATGCCAGGCTTGGACGGTGATGCATGCAGAAAATGCTCTG
CTTGCCGCCGATGAGACCGATGGAAGAGCTTTACATTTCGAAGGAGGATTACCGGTTACA
TCACTCGTACTAAGCACTATCATCAGATCATTTAAATCTGTGAAGAAGCCCTCGCCTCTG
ACTCCAGACCAGAAACACAAGTTCGGGGCCTACTTGTTATCTCGTCGCTCGGCGTCAGCA
CCACGCACTGTTGCTTCTCTCATTGAAGCTGCAAAAATTCTTGCCGACGATCAGCCTACT
CCCATTTGCATCGTGTTCAAAGACAAGAAATACATCACGTCAGAGACGGATTCCATTGAA
TTTTCAGTCACAGATTTAGTCGGTAGAGCCATTCCAAACCTGAAGCCTGATGAGGTGGTC
GCCCAGTCGGGCACTAGGCTGGCCGATGACGTCGTCGTCCTATCGAAGCAGCCGCTGACA
CAGAAACCTAACGAGCCATCGACCTTCGTTTTAAATCTCAGCAAGATTAAGTCTCAGTAC
GGTCTATACAAGATATCTCTCAGTACGGGAAGCAAGTCGGCCAACTTCAACGTAGCAGTG
CTCGGAGAGATACAAGTGTCCAGTGTTGAGATCGGAGTGGGGGATGTAGATGGCACCACC
AGTCCTAAACTCACGACAGTCGCGTACCCCAACAAGATGGCTGAAGTACTACAAGCTGAT
CATTTACAAAAAATGAGCGTGAAGTTCTCAATCCGCGACAAGTTCAACAAGCCGGCGCTG
GTGCAGCAAGCCTTCCTGCACGTGGCCTCGCTGCAGGACGAGCGCGAGGCGATCTATGTA
GCGGAGCCCGACCACGCCAAGAACTATAAAGTGGAACTGAACGTGGGCGCCATGGGCAAG
CACCTGGACTACGTGTCAGGCTCGTACTCCGTGAGCGTGCTGGTCGGAGACAGCGCTGTG
TCGGCGCCGCTGGCCTGGCGTCTGGCTGATGTCAAACTCAGCTTCGGCCGGGATGCTGTC
GCCGAGGCGAAGTCTCCTCGAGGACGCGGTCCCCTGCCGGAGATCTCGCACGTGTTCCGC
GCGGCGGAGCCCCGGCCCCCCCGCGCCCTGTCCGACGTGTTCTCCCTGGCGTGCGCGGCG
CCCCTGCTGCTGCTCCTCATCCTGTGGGGCTCGCTCAGACTGAACTTCTCTCTCTTCCCC
TTCACACCCAGCGCTCTCCTGTTCCACGTGGCGCTCGGTGGTACGTTAACATACAACACG
GCACACGTACTGATACAAACAGTATTTATTATACTCAAAAGTGTAATTAAAGAGAAATAC
TATTGGTTTCCACGATACTTCTCAATTTCACTGTTTTCTTAG
Protein sequence:
MNKLAQLFIVLSILAVSNAILQGIINVKHFQSLLEEGIKSKDISTLYHSIKGLKQLNVKL
PNLCEDIKNSKYDIKNIEHVFYLTNAAELTGCQNFLLPDVLGTPAKVLNNKDVTIPEIYY
AVYSLKAIGRGSVYDREDGLKNLIQMLKKDDSPANYGYVFGLCEHMGCQAWTVMHAENAL
LAADETDGRALHFEGGLPVTSLVLSTIIRSFKSVKKPSPLTPDQKHKFGAYLLSRRSASA
PRTVASLIEAAKILADDQPTPICIVFKDKKYITSETDSIEFSVTDLVGRAIPNLKPDEVV
AQSGTRLADDVVVLSKQPLTQKPNEPSTFVLNLSKIKSQYGLYKISLSTGSKSANFNVAV
LGEIQVSSVEIGVGDVDGTTSPKLTTVAYPNKMAEVLQADHLQKMSVKFSIRDKFNKPAL
VQQAFLHVASLQDEREAIYVAEPDHAKNYKVELNVGAMGKHLDYVSGSYSVSVLVGDSAV
SAPLAWRLADVKLSFGRDAVAEAKSPRGRGPLPEISHVFRAAEPRPPRALSDVFSLACAA
PLLLLLILWGSLRLNFSLFPFTPSALLFHVALGGTLTYNTAHVLIQTVFIILKSVIKEKY
YWFPRYFSISLFS