| New model in OGS2.0 | DPOGS206472 |
|---|---|
| Genomic Position | scaffold1189:+ 22451-29970 |
| See gene structure | |
| CDS Length | 4728 |
| Paired RNAseq reads | 975 |
| Single RNAseq reads | 2302 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005423 (0.0) |
| Best Drosophila hit | mediator complex subunit 1 (1e-101) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 1 (2e-72) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006213 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006213 [Tribolium castaneum] (1e-159) |
| GeneOntology terms | GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex GO:0005634 nucleus GO:0006366 transcription from RNA polymerase II promoter GO:0006367 transcription initiation from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter |
| InterPro families | IPR019680 Mediator complex, subunit Med1, metazoa/fungi |
| Orthology group | MCL18015 |
Nucleotide sequence:
ATGGCGACTGTAAAAGGACAATTAGATAAATCTAAAGAACTCCAAAAAGAGATACTTATG
GAAAAACTTCGATCGAAAACGTCACAGTATAAAAATTTAAGTGAAACTTCCAAAGCTGTT
CGTATGGCTTTGTTGGATAAGAGATGGGCAGTGGATAATGCGGATCGTATGATTCTACAG
AAGTGCTTGGATAGCTTACAACATTGTATTAAAGTCAGTTCCCTGCAAAGCCTTATCGAA
AGACTGGAGTGTCTGTCAAGACAGCTCGGACTGAAATTTGTTGTGGGAACATCAGGTGTT
AACTTATTTATATCTTCAGATATGTTTTATTTGGAAATATTAGTTGAATCATCGGGATCT
GTGAAAGATGTGAAAATACACCATGAGGGCAAGATTGAGCAGCAAAGTTGCGAAGAGCTG
GTGCAGTGTATATCACGTGGAGACTTCGCCGACTTCACAGCACAACTGGAAGGACTGACG
GCAGTTTATCAATTGAATGCTGAAAAGAAAGTTAAATGTAAAGCGTTCAGTGCTCTACAA
AGTTTAGAGGAAGATTTATGTACGTTGAGACAGTTGCAAAGTTTCATTAAGGATCCATGG
GCACAGGTCCATAAAAGCCCTATAGGGTTTTTGCAGAGACGGCGAGGAGGTCATGCGTTG
CGTCTCACCTATTTTGTGTCGCCGTATGAGCTTCTGGATAAAGAGAAAGGTTTGCAGCCC
TTGACAGTTGATTTACTAACTTCTGGTAAACCATCTTCATCAAGCGGATTGGCTTCACTT
GTGTCACCATCTCATACACCTATAGGGCATTCAGCGACGGTACTCTTAGAAGGTTCTGCA
GCCAATAAGCTCCAACTATCACCGATCATTGCTGGTGGACAGCGACCAGGGAAAGGGAAT
GGTCCAGTGTATGCACAGCTTGTTCCACAGAATAGTGCTATGTTACCAGCATGTTTCACT
CTTAAATTATCTCAACCCACTCCTATGTGTGCTGGTCTTGCCAAATTGATACACGCAACT
ACAGATGTTGAAGTCGCTGGTGATTGGGCTAACGCTAAGCCTATGTTGGGTCTTGTGGCC
CAACAAGCTTATAATAAACTTGCTCCTGGTAAAACAGTTGAACTAAATCTCAGCAAAGGA
CTCTTTGTTAGTCTGCCGGAGCAGTGGCAGTGTTACTTCCTATGTGAAACGCGAGGCTTG
GACGGCTGTATGGTGACCAGCGTTCCCTTCACTCATCCGAGTCACGTGCCACCCCTACTG
TCTGTGCTGAGGCAACAAGCGCTGTTTAACGCGTTACTCGCCAGCTGCGTCAGGCTGCAG
ACTAAACAAGTGATGGAGTTGGAAAGCGTCCTGATGTTCGAAGTGAGCGCCCTCTCTTGG
CAGCATATCTCAATATCTCTAGAACACCCTGTAGATGAGAGTATGGCTACAGTGGAACTC
GATCTAGCCGATCCAGCGGCTCCCCGCGCCTCGCTTTACACCCTCAACTCACCTCCCAGA
GATCATATAGATGACTATATAACGAAAGTACTACAGAAGAGCCACTCCATACCAGTGACA
CTTAGGTCACTTATAAAAATATGGGAGCGTGAACGAGCTACGAAGCAGATAAATGGTAGC
TACTCCGCTTTGGAGTCAAATTTTAGCTGTGGCCTGGGGGGCATCGACCCCGGGGGTGAC
GTTAAACACGAGCCCGGCAGTATGCATGGCCGGGCTATGTACCCTGCCAATGTTAGCCAC
CCACATCAAGGAGGTACATATCTTTCGGAACAGCAACACCACTTGTCTATGATGTGTCAA
GACAATCCCAGCGATCTAAAACCCGCTGGTTCAGAAGAGCGAAAATCAAAAAAGCGTAAA
GTGGAGCCAGGTTTATGGCCTTCTGGCCAAAAAAAGGGTAAACCTGGTATGAATGATATG
ATGGACTCTGATAGCGAGAGCGACAATTCAGATGGTTACGGCAATGAAGATGACACTATG
AACAGCAATTCAACAAATGATGACATAGAGGGTCCATCGTCTGTGTCCCAGAATGAATTC
GCTTCAGACTTGGAATTGTACGGTATGGACACTCCAGACGCACTGGGCGGACAAGAAAAC
AGAACATCGTCTGATATGGACAACTCCAACGACGGTGATGTCGAAGATATAATCAGGAAT
TCTTTTCACAAGTCTGAGCACAAAAGGCAAAAACTTAAAAGTAAAGATTCGGAGTCGAGA
AGAAGTACATCGTCGTTACTGTTGGACCTGACTGAAGGAAAGTCTTACATGCCTTCCTCT
GTAAGCATAACTCCTATAGGATCAACTTCATCGAACCCCCCCAGTTCGGGATCTGGGTCC
AATATATCATCAATGTTATGTCTGGATAGAAGACCCGGTATAGAAATTATACCGATAACA
GCAGCTCCACCGGCTGCTCTGCCCAGTTCTATAACTATCACGCCAATAACGTCTTCGCAG
ATAAAGTCACTTGATGATAGAATGAGATCCGACAAAAAATCAAGCAGATCAGGCGAGGAA
CGTAGTAAAGAAAAGAAAAAGAAGAGGCGTCGAGACGATTCTATGGGCCCGCCGGAAAAG
ATCCCACCCAAACAAGATCCTTTAACCAAACCTGTATCCGTAAGTATTAAACCCACTGAC
GGTTCTCCAATGCGTCCGACTTCCCCAAACTCCATCTTGAGAAAATTTAGTCCAAGTCCC
ACACAAGGCAGGTCTGTATCTATCTCCAAATCACCAAGTCCCAGCAGTGTTAAGGGCATG
GGAAAACCATCAGGTACGTCCAGCCACCACAGTAGTCCTAGACACTCACCCGTTCAAAAC
AGTCCAAAACATTTAACAGGGTATTCGAGTCCAAAAAACCACAGTATTTCGTCGCCGAAA
CATAGTTCGTCCGGCTCGGGCAAACCTAGTATGTCAACTTTAAAATCTGCAACTAGTGGC
TCCCCTTCCGGGAAATCCAGTGCGACGGGTTACGATCTGTCAAAAAAGTTATCTAAAGAA
AGTTACGGTTCCAGTTCAGCTACCTCTCGCGACAAAGAAAAGAAACATTCCAGTTTATCT
TTTTCCAGTTCCGATAGAAGCAGTCCCAAATTAAAAAACCCAATGAAATTGAAACAGTTA
GAAATAACCCCAGTCTCTTGTGATAGTCCCGTAACCGAGCCTCTGATATCCCCATCTAAC
ATAGAAGTAAACAAATCTAACGCTCCAAGCCAAGCTCGAAACAGGAAAGGTTCTCTCAGT
GCGGTAATAGACAAGTTAAAATCTGCTCAACACTGTGGTGCTGAATCAGAAATTACTATA
AAATCAAGTTCAAGTAGTAGTAGTAAATTTTCTGACCCAAAAAGCAGTTCTAGTAACGTT
AAAATAAATGAGAGTAAAAATCAAGAATATATGGTGAAACCGAGTCTTGATGGCATGAAG
ATAACAATAAACAAAACTAGATCGAAAGAATCGTCGAGCAGTAGTTCGAAGTTAAATTAT
TCGAGCTCAAGTTCTAGCAAACAGTCATCACCCCAACTCACTCCGCCCAGCCAAGGTTCG
CCTAAAACTCACACCGGTCTGAAACCCGGTGTAATAAGTGGACCCGCTTCAAAAAAAACT
CAAGTTATGCAGTCATCCAAATCTGCTAGCATAGCATCAGGCTCCACACCTACCAAAGCC
AATTTGAGTCCATCCGAGCAGTCCGGCTCTAATAGCAACAATACTCAAAAAGTGCCTTAT
ACCAAATCAAGTAGCAGTTCCACTGGCATCAACTTGTCTTCGAAATCAGTATCAAAAAGT
TCCGGTTCCCCAAAAAGCACAAGTTCAGATCTTGCTAAAATTATGAAAGAACGAGAAAAA
GCTAGAACAAAATTTCTTAGTAATTCCGAAAAATCTATATTTACTTCAAAATCTGAGCGT
CACTCGAGTCCAAGTAGTTCTAGAGATGATGTAGACGGTGACAGATTTAAAAATTCTAAA
GACGCCAATTTCCTAGTCGAAGGTTTAATGAAGCCGCTTGATACTAGTAAATTTCAAATA
CCCAAATTGAAAAATCAAAATACTCCCGATAAAAACAGTCCCGTATCGCAGTACGACAGC
CGTTCCATGGTTAACGATTTTTCCCGATCTGTAGATCAAAGTAAATATCCATTTCCCCAC
TACGATAACTCGAACAGGAATATAGATACCATGCAAAAATCAGTATATCCCCTCAATGTG
CCGAAACCTTTATTAAACATGGGTGGTATAAGCCCGAAAACTATAGTGGCCGGTAAAAGT
GACCAATCAGAGTATTCCAAAGCGATGTCAGATAGCATAGCGAAAGGAGAAAGCCCACAA
CGCATTAAAGATGAAGTGAAAGAGGGTTATTCGGGTGCATACCCATTGATGCCTTTAGAT
TTCAAAACGGACATGGCCAAGGGGTTTCCGGCGCCGAAGGGAAGTTCGGAGGATAGGAAG
GGGGCGGATTCTTGTATGAAACCACCAGCGAGTGGGACGGTGGCTCGTAGTGGCGCTACG
ACACCGCAGGAAGCTGCAGAAATGTTACTAGACTTCTCATCATCATCTGGTAGTAAAGTA
TCGGGTGTGGTCTCAGTCCGTCCAGTGTACCCGGCCTCGCCAGCCTTATTGCAATTAGCG
AAGAGTCCCGCCTCGTCACCCCTGGTAGCTCCTTCCCCCCATTCCAACTCTCCTTGCATC
ACCGACGACGAACTCATGGACGAAGCCCTGGTGGGCCCCGGGAAGTAA
Protein sequence:
MATVKGQLDKSKELQKEILMEKLRSKTSQYKNLSETSKAVRMALLDKRWAVDNADRMILQ
KCLDSLQHCIKVSSLQSLIERLECLSRQLGLKFVVGTSGVNLFISSDMFYLEILVESSGS
VKDVKIHHEGKIEQQSCEELVQCISRGDFADFTAQLEGLTAVYQLNAEKKVKCKAFSALQ
SLEEDLCTLRQLQSFIKDPWAQVHKSPIGFLQRRRGGHALRLTYFVSPYELLDKEKGLQP
LTVDLLTSGKPSSSSGLASLVSPSHTPIGHSATVLLEGSAANKLQLSPIIAGGQRPGKGN
GPVYAQLVPQNSAMLPACFTLKLSQPTPMCAGLAKLIHATTDVEVAGDWANAKPMLGLVA
QQAYNKLAPGKTVELNLSKGLFVSLPEQWQCYFLCETRGLDGCMVTSVPFTHPSHVPPLL
SVLRQQALFNALLASCVRLQTKQVMELESVLMFEVSALSWQHISISLEHPVDESMATVEL
DLADPAAPRASLYTLNSPPRDHIDDYITKVLQKSHSIPVTLRSLIKIWERERATKQINGS
YSALESNFSCGLGGIDPGGDVKHEPGSMHGRAMYPANVSHPHQGGTYLSEQQHHLSMMCQ
DNPSDLKPAGSEERKSKKRKVEPGLWPSGQKKGKPGMNDMMDSDSESDNSDGYGNEDDTM
NSNSTNDDIEGPSSVSQNEFASDLELYGMDTPDALGGQENRTSSDMDNSNDGDVEDIIRN
SFHKSEHKRQKLKSKDSESRRSTSSLLLDLTEGKSYMPSSVSITPIGSTSSNPPSSGSGS
NISSMLCLDRRPGIEIIPITAAPPAALPSSITITPITSSQIKSLDDRMRSDKKSSRSGEE
RSKEKKKKRRRDDSMGPPEKIPPKQDPLTKPVSVSIKPTDGSPMRPTSPNSILRKFSPSP
TQGRSVSISKSPSPSSVKGMGKPSGTSSHHSSPRHSPVQNSPKHLTGYSSPKNHSISSPK
HSSSGSGKPSMSTLKSATSGSPSGKSSATGYDLSKKLSKESYGSSSATSRDKEKKHSSLS
FSSSDRSSPKLKNPMKLKQLEITPVSCDSPVTEPLISPSNIEVNKSNAPSQARNRKGSLS
AVIDKLKSAQHCGAESEITIKSSSSSSSKFSDPKSSSSNVKINESKNQEYMVKPSLDGMK
ITINKTRSKESSSSSSKLNYSSSSSSKQSSPQLTPPSQGSPKTHTGLKPGVISGPASKKT
QVMQSSKSASIASGSTPTKANLSPSEQSGSNSNNTQKVPYTKSSSSSTGINLSSKSVSKS
SGSPKSTSSDLAKIMKEREKARTKFLSNSEKSIFTSKSERHSSPSSSRDDVDGDRFKNSK
DANFLVEGLMKPLDTSKFQIPKLKNQNTPDKNSPVSQYDSRSMVNDFSRSVDQSKYPFPH
YDNSNRNIDTMQKSVYPLNVPKPLLNMGGISPKTIVAGKSDQSEYSKAMSDSIAKGESPQ
RIKDEVKEGYSGAYPLMPLDFKTDMAKGFPAPKGSSEDRKGADSCMKPPASGTVARSGAT
TPQEAAEMLLDFSSSSGSKVSGVVSVRPVYPASPALLQLAKSPASSPLVAPSPHSNSPCI
TDDELMDEALVGPGK