| New model in OGS2.0 | DPOGS203949 |
|---|---|
| Genomic Position | scaffold65:+ 89247-90092 |
| See gene structure | |
| CDS Length | 846 |
| Paired RNAseq reads | 6 |
| Single RNAseq reads | 18 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013330 (5e-100) |
| Best Drosophila hit | crocodile (4e-48) |
| Best Human hit | forkhead box protein C2 (5e-47) |
| Best NR hit (blastp) | PREDICTED: similar to forkhead protein/ forkhead protein domain [Tribolium castaneum] (2e-65) |
| Best NR hit (blastx) | PREDICTED: similar to forkhead protein/ forkhead protein domain [Tribolium castaneum] (4e-58) |
| GeneOntology terms | GO:0005634 nucleus GO:0007380 specification of segmental identity, head GO:0003677 DNA binding GO:0003702 RNA polymerase II transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR001766 Transcription factor, fork head IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR018122 Transcription factor, fork head, conserved site |
| Orthology group | MCL15024 |
Nucleotide sequence:
ATGGTCAAACCTCCCTATTCGTATATTGCACTGATAGCAATGGCGATTCAAAATGCACCC
GATAGGCGAATAACCCTCAATGGTATATACCAATTCATCATGGAACGTTTTCCTTATTAT
AGAGAAAATAAACAAGGGTGGCAAAACTCAATACGACACAACTTGAGTCTTAACGAATGT
TTTGTTAAGGTTGCAAGGGATGATAAAAAACCCGGCAAAGGAAGTTATTGGACGTTGGAT
CCAGATTCTTATAACATGTTTGATAACGGATCTTATTTGAGACGACGTCGCCGTTTCAAA
AAAAAGGATGCGCTTAAAGAAAAAGAAGAAGCTTTGAAACGCCAGCAACAATTACAACAA
GCGCAAGAACTGGCGGCACAGGAAGCTCTTAGCGCTGCTGATGCTTTAGGACAAGCGCGA
GACGTCAAGCCAGACGTAAAGCCTAGAATATTTGAATGTAGACCAAAACGAGAACCCGGT
GCGGATTGCACGCGGTATGACAAATTAAGTGAGCCTATAGACGAGTTTAGCGAGCCTCGA
TTACCGCCCTCCGCAGTTTACTGTTCGCCACAGCCATATTCTTTAGCAGCCGAGGAGTTT
CGAGCAGCTACAAGCGGCTGGTATTCTGCACCCGAACCATCCGCTGACCAGCTTCCGCCA
GCTTTTCGGGACCTCTTCGAACCGCCTAGTTGCCAGTTGGCGGGATACCGCGGCAGTTCA
CCGGCTCCCGACGCTTACCGCGCTTCACCTCCACCTCACCACCACTACCGTTCGCCAGCT
CCATCCTACTACCATCATCAAGCTTGCGTAGCCGCCGCACCCGCCTCTGCTCATAAATCC
TACTGA
Protein sequence:
MVKPPYSYIALIAMAIQNAPDRRITLNGIYQFIMERFPYYRENKQGWQNSIRHNLSLNEC
FVKVARDDKKPGKGSYWTLDPDSYNMFDNGSYLRRRRRFKKKDALKEKEEALKRQQQLQQ
AQELAAQEALSAADALGQARDVKPDVKPRIFECRPKREPGADCTRYDKLSEPIDEFSEPR
LPPSAVYCSPQPYSLAAEEFRAATSGWYSAPEPSADQLPPAFRDLFEPPSCQLAGYRGSS
PAPDAYRASPPPHHHYRSPAPSYYHHQACVAAAPASAHKSY