| New model in OGS2.0 | DPOGS210172 |
|---|---|
| Genomic Position | scaffold2630:+ 8946-13217 |
| See gene structure | |
| CDS Length | 1464 |
| Paired RNAseq reads | 4064 |
| Single RNAseq reads | 9082 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014140 (1e-47) |
| Best Drosophila hit | CG7686 (9e-40) |
| Best Human hit | protein LTV1 homolog (3e-26) |
| Best NR hit (blastp) | PREDICTED: similar to CG7686-PA [Apis mellifera] (3e-126) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC008848 [Tribolium castaneum] (8e-44) |
| GeneOntology terms | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
| InterPro families | IPR007307 Low temperature viability protein |
| Orthology group | MCL14997 |
Nucleotide sequence:
ATGCCGAAAGCTAAGAAAAAGTTTATAGATCGCAAAAAAGCTGTAACTTTCAATTTGGTG
CATAGATCCCAAAGAGATCCCTTAATCGCCGATGAAACCGCTCCTCAACGTGTGCTTGTG
CCCGTGAACGCCAGTATTCCTGTAAAAAAAGAAAAGGAACCTCATTTATCAGTAGAACAA
AGAAAAGAGGAGCAGAAAAAATATGGCATATACTTTGATGATGATTACAATTACCTCCAA
CATCTTAAAGATACCAGAGAAGTTACAATGGTGCTGCAACCTAAAGTGTCACATAAAGGG
AAAAAAGTTAATGACGGAGCTATTAGTGAACAATTTGATGATGGTGTAGAAGAGAAAATC
CAATTGCCGAGCTCGGTTTTTGCTTCTGAAGTCGAAGAAGATGTGGGATTGTTGAATAAA
GCGGCTTCACAAGGGCTCTGTCTCCAATTGGATCCCGATGTAGTAGCTGCTCTGGACGAG
GACTTTGATTTTGATGACCCCGACAACGAGCTAGAGGACAATTTCATTGAAATGGCTATG
GGAGAAGGTGAAGATGGTGACTATGATGATGGTGATAGTGGAGATGATGAAGGCAGTATG
TCCGGTGATAACTCTGATAAAGCATTCGCATCAGATTTTGACTCTGATGATGACAGTGAT
CGATCGCAGGAAGGACGACCGAACATGCCATCGTGGGACAAAGAGGACACCAAGTCTAGA
TTTTCACAATACTCTATGTCCTCGAGCGTGATCAGACGCAACGAAGGTCTCTCCTTATTG
GACAATAGATTTGAGAAGTTGTATGCAGAATATGATGATACAGAACTGGGAGCACTAGAT
ATGGATGAGATAACTGGCTTCATGCCGGAGTCACATCGCATGCTGCTGCAGGCTGCTGAG
GAGTTTGAGGAATCACAGCGAAGGAAGGAACTGAGCCGAGAAAATGACACCAGGATGAGA
TACCTTCAACAAATTGCCGAGGAGTCGGATGAAGATCTCGTGTCAGTGGACGTGGACCCT
CAGGAGAAGTGGGATTGCGAAACTATACTGTCAACTTACTCCAACTTGTACAATCATCCC
AAAGTTATTGAGGAACCAAAGAAACCGGCCAAAATTAAGATCAATGCGAAAACCGGTATA
CCTGAATCAACGCTGGGGAAAGACAATACACTCACAATGAAATCTCTGGCCAAGTTCAAT
GCTATGAATAAAAATGAGGATGTCTCTGATGATGAACGGACCAACGCTGAGTCAGTGCTG
TCGACATTAAGCGTTCTGTCCATAAGACCTAAAGACGAAACAGCAGAAGAAAAGAAAGAG
AGGAAACGTTTGTTAAAAGAATATAGAAAAGAAAGAAGAATCGAAAAGAAAGCAAACAAA
GAAGCATTTAAAGAAGAGAAGAAACGACAGGAGAAAATTATGTTGAACAATAGAAATAAT
GTCCAAGGGAATAGAATTTTGTGA
Protein sequence:
MPKAKKKFIDRKKAVTFNLVHRSQRDPLIADETAPQRVLVPVNASIPVKKEKEPHLSVEQ
RKEEQKKYGIYFDDDYNYLQHLKDTREVTMVLQPKVSHKGKKVNDGAISEQFDDGVEEKI
QLPSSVFASEVEEDVGLLNKAASQGLCLQLDPDVVAALDEDFDFDDPDNELEDNFIEMAM
GEGEDGDYDDGDSGDDEGSMSGDNSDKAFASDFDSDDDSDRSQEGRPNMPSWDKEDTKSR
FSQYSMSSSVIRRNEGLSLLDNRFEKLYAEYDDTELGALDMDEITGFMPESHRMLLQAAE
EFEESQRRKELSRENDTRMRYLQQIAEESDEDLVSVDVDPQEKWDCETILSTYSNLYNHP
KVIEEPKKPAKIKINAKTGIPESTLGKDNTLTMKSLAKFNAMNKNEDVSDDERTNAESVL
STLSVLSIRPKDETAEEKKERKRLLKEYRKERRIEKKANKEAFKEEKKRQEKIMLNNRNN
VQGNRIL