| New model in OGS2.0 | DPOGS202278 |
|---|---|
| Genomic Position | scaffold3542:- 64-8645 |
| See gene structure | |
| CDS Length | 2469 |
| Paired RNAseq reads | 253 |
| Single RNAseq reads | 736 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000065 (1e-80) |
| Best Drosophila hit | CG1753, isoform B (2e-105) |
| Best Human hit | cystathionine beta-synthase (1e-106) |
| Best NR hit (blastp) | GJ24676 [Drosophila virilis] (8e-120) |
| Best NR hit (blastx) | cystathionine beta-synthase s [Glossina morsitans morsitans] (5e-118) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0008652 cellular amino acid biosynthetic process GO:0016829 lyase activity GO:0016740 transferase activity GO:0046872 metal ion binding GO:0003824 catalytic activity GO:0006535 cysteine biosynthetic process from serine GO:0019343 cysteine biosynthetic process via cystathionine GO:0030170 pyridoxal phosphate binding GO:0008152 metabolic process GO:0004124 cysteine synthase activity GO:0050667 homocysteine metabolic process GO:0005634 nucleus GO:0001958 endochondral ossification GO:0051593 response to folic acid GO:0005625 soluble fraction GO:0004122 cystathionine beta-synthase activity GO:0019346 transsulfuration GO:0043506 regulation of JUN kinase activity GO:0019344 cysteine biosynthetic process |
| InterPro families | IPR001926 Pyridoxal phosphate-dependent enzyme, beta subunit IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site |
| Orthology group | MCL10692 |
Nucleotide sequence:
ATGTTCAACTTATTTCAGGCTAAGCATAAATACAGTTTAGGTCACAAAGTTGCACACTTA
AATCATCGGAGGTCGCCATATGTCAACAAGGTATACAATAGCATATTGGACTTTGTTGGG
AACACGCCGCTTATAAAACTGAACAAAATACCAAAGGATTATGGAATCCATTGTGATATT
TACGCAAAATGTGAGTTCATGAACCCGAGTGGCTCGGCAAAAGATAGAATAGCGTTGGCG
ATGCTTCAGGATGCTGAAAAAGGCGGCTTCATTAAGGAAGATTCAAAATTTGTTGAGCCA
ACTTCCGGAAACACCGGCATTGGGATTGCCTTCAACAGTGCTCTAATGGATAAGAAATGC
TACATCGTCATGGGCGAAAAGAACTCAAGAGAAAAACTAACTACTATGCAGGTTCTTGGA
GCTGAAACAATCAAAACCAATGGCACATCAATACAAGTTGCTCGAGATATTAAAGATTCT
GATCCTGAGAATTATGTTATGTTAGATCAATTCGAAAACAATGTTAATCCGAGAGTTCAT
TACGAGAACACGGGAGTTGAAATTTTGGAGGCGTTGGGCGATGTAGACATGTTTGTCGTT
GGTTGTGGCACCGGTGGCACTTTATCTGGTGCTGGCCAAAGGATCAAAGAGAAGTGTCCG
AAGTGCACCATAATTGCTGCGGAGCCAGCTGGATCAACTATGTTTAATGTATCCGGAATA
CCACATCCGTATTTGGTAGAAGGAATAGGAGGACAGGAAGTTCCTATTGTCCTTGACAAA
TCTTTAGTAGACGATTTCGAAATTGTGACGGATAAAGAAGCGTTTCTCATGTCGCGGGAA
ATAATTAGAAAGGAAGGATTACTTTGTGGAGGCAGCAGCGGTGCGGCAATGGTTGCAGCA
ATAAAAGCAATCCAGAAGCGAAAATTCACTGCCGGTCAGCATGTGGTAGTCGTGCTACCA
GACAGCATTCGTAACTACATGACCAAATTCGTCACTGATCAATGGATGGAAGCTCACCTC
TTTATTGATCCACCACAACACGCTTCACCGTGGTGGAATGATCCCGTCACTCACTTAACC
CTGGGACACACTTACCCTATTCTAAGCAGTGACCAAACGTGCTCTGAAGCCATACTCGAA
ATGATGAAAGAGAATATTGCTATTGTGGTAGAGACGAACGGAAATTTCTTAGGAGCAGTG
ACAAAGGATGGCCTGCGTTCAGAAGCAACAAATCCAATGAGACTTCCACACAAAAGTATT
CAAGAGCTAAACTTCCAAGACTTTGTATCTGATCATTTGGTCAAAGATTGTTTCACACTG
GCCAAGAACAGTGAACGTGGAATGCCAACTATAGGTCTATTATCCCGCATGTTGGACGTA
GCACAATTTGTTGTCATCGGAAGAAATGTACATGAACTTGGACAAAATGCAAAATGTGAA
TTCGTGAATCCTGGCGGTTCAGTGAAAGACCGCATAGCTTATAGAATGGTTTTGGATGCT
GAGAAGAAGGGAATATTGAAACCTGGAAAATCGGTGATTGTTGAACCAACTTCTGGAAAC
ACTGGAATTGGACTAGCTTTAGCAGCGGCTGTGAGAGGCTACAGATGTATAATTGTTTTA
CCGGAAAAGATGTCAAATGAGAAAGTGCTCACCTTGCATGCTTTGGGAGCCGAGATCATC
AGAACACCCACTGAAGTGGCGTGGGACTCCCCTGAGAGTAACATCATGGTCGCTAAACGC
TTGTCCACAGAAATCCCGAACGCTGTATTGTTGGATCAGTATAACAACGCTAGCAATCCG
TTAGCCCATTATGACGGAACCGCTGAAGAGATACTCTGGTCTCTGGATAATGATGTCGAC
ATGGTGGTATTGGGAGCGGGCACCTGTGGTACCATATCTGGAATTGCTCACAAGATTAAG
GAAAAGTGCCCAAAATGCGTGGTAGTTGGAGTAGACCCACACGGCTCCGTGCTGGCCCCA
CCAGATAAACTTAATGAAAATGACGTAGAAATATATGAGGTAGAAGGAATCGGCTACGAT
TTCTTACCACAAGCGTTAGATCTTAAAATAATAGACAAATGGATAAAAACAGAGGACAAG
TGGTCCTTCCAGATGGCGAGAAGACTTATCAAGGAGGAAGGACTGCTTTGCGGAGGTAGC
AGTGGCGCCGCTATGTGGGGTGCCATACAAGCAGCGAAGTCTTTAGTGGCGGGTCAGAAA
TGCGTGGTCCTATTACCGGATAACATACGCAACTATATGACAAAATTCCTCACTGACCAA
TGGATGGAGGTCCGCGGATACAAATCCATCGAAAGTAATGATAATTTATGGTGGTGGAAC
AAACCTTTGACGGAAGGTTTAGTGCGTATCACAAAGAATATATGTCAGAACAGCACAACC
TCGGAGGCGATAAAAGCTTTGAGGGAAAGTGACTCGTTAATCGTCAATATCGTTAATGAC
AAAGGGTAA
Protein sequence:
MFNLFQAKHKYSLGHKVAHLNHRRSPYVNKVYNSILDFVGNTPLIKLNKIPKDYGIHCDI
YAKCEFMNPSGSAKDRIALAMLQDAEKGGFIKEDSKFVEPTSGNTGIGIAFNSALMDKKC
YIVMGEKNSREKLTTMQVLGAETIKTNGTSIQVARDIKDSDPENYVMLDQFENNVNPRVH
YENTGVEILEALGDVDMFVVGCGTGGTLSGAGQRIKEKCPKCTIIAAEPAGSTMFNVSGI
PHPYLVEGIGGQEVPIVLDKSLVDDFEIVTDKEAFLMSREIIRKEGLLCGGSSGAAMVAA
IKAIQKRKFTAGQHVVVVLPDSIRNYMTKFVTDQWMEAHLFIDPPQHASPWWNDPVTHLT
LGHTYPILSSDQTCSEAILEMMKENIAIVVETNGNFLGAVTKDGLRSEATNPMRLPHKSI
QELNFQDFVSDHLVKDCFTLAKNSERGMPTIGLLSRMLDVAQFVVIGRNVHELGQNAKCE
FVNPGGSVKDRIAYRMVLDAEKKGILKPGKSVIVEPTSGNTGIGLALAAAVRGYRCIIVL
PEKMSNEKVLTLHALGAEIIRTPTEVAWDSPESNIMVAKRLSTEIPNAVLLDQYNNASNP
LAHYDGTAEEILWSLDNDVDMVVLGAGTCGTISGIAHKIKEKCPKCVVVGVDPHGSVLAP
PDKLNENDVEIYEVEGIGYDFLPQALDLKIIDKWIKTEDKWSFQMARRLIKEEGLLCGGS
SGAAMWGAIQAAKSLVAGQKCVVLLPDNIRNYMTKFLTDQWMEVRGYKSIESNDNLWWWN
KPLTEGLVRITKNICQNSTTSEAIKALRESDSLIVNIVNDKG