| New model in OGS2.0 | DPOGS213505 |
|---|---|
| Genomic Position | scaffold2435:+ 3282-5960 |
| See gene structure | |
| CDS Length | 2163 |
| Paired RNAseq reads | 312 |
| Single RNAseq reads | 929 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011920 (3e-12) |
| Best Drosophila hit | ZC3H3 (6e-28) |
| Best Human hit | zinc finger CCCH domain-containing protein 3 (1e-20) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (5e-32) |
| Best NR hit (blastx) | PREDICTED: similar to CG6694 CG6694-PA [Tribolium castaneum] (1e-33) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0006378 mRNA polyadenylation GO:0051168 nuclear export |
| InterPro families | IPR000571 Zinc finger, CCCH-type IPR019146 Uncharacterised protein family UPF0406 |
| Orthology group | MCL15677 |
Nucleotide sequence:
ATGTCAGGTTTGTCCTTTATAAGTCAGTACGGCGACGACGAGGATTCACAATCAGATGAA
AACGACGACTGTAAAATACCAAAGATCAAATTACCAACACCAAATTTAAGTGAAGTGTCC
GTGGTTTCCACCGAAGAACATATTGACGAGCCAAGTCTGCATGGAGGAAGACTTAGATCT
TTTCCCCATGTGAGAGGAAACTGGCCCAGCTTCATATACATTGAATACCCAGAACAGGAT
CACTTGCATAAAACTATAAATAAGTTATCAAATTTTGTGTCATCGCTAAACATTTTATGT
AATAGATGTGATGGTATACATTTGAGTCTTTCTAAAACATTTACTATACAGTACCATATG
ATAAAACCTTTATCATCTGCTCTCCAAGAAGTTCTTGGTTATATTGAAAGCTTTGAATTA
TTTTTTGATAGCATCGAAGTTTATTGTAACGAAGAAAAAACTAGAACATTTATTGCAATA
AAAGCAGACATTTACAGCAGCAAGATTTTGGCAAATATAACTGACAAAATAGATGGTATT
TTAGAAGATTATAAACTACCAAAATTCTATAAGGACCCATCATTCCATATCAGCATTTTG
AGCGTAAATGGTAATAAGAAGAACGACATACTTAGAATTGTAGAAGACTTAAATAAAATA
TTAATAAGAAATCCACAAACATCTACAGGACCATTGCAGTACAAAACAGCTTATGTAAAT
AGACATTTTTCTCAAGAAACATACCAAAATCAAGTACATCAACCTCAAGACGATGTTAAC
AATAGAAAAATATATGTCAATCCAAATTTTATAGCTCCCACCAACCACCACCAACCATAT
GACAATGTCCGAACAAATGTTTCTCATAATTATATTGGAAATTTAGTACCTAACATGTAT
AGCGTAAGCAATATAGAACAAAAACATTCATTTATCAATGACAACTTGGAAATTAAAAAC
TCATTGTATAGTATAAGGTTATCGCGAAATACTGGAGAACCTTCCGCTAAAGAAAACCTT
AAAGTTACAGAATCTTTCACTAATTCTTTAGAAGCTCCGTTGACAAAATCACGTTACAGC
CTAGTAAGGAAATCGAAACCCATATCGAAGAGCATTGCAATAACAAGCAATAGTTATAAA
GACAATACAATACAAAATACTCACAACGTCTTATCCCACGCTTCAACGAGTTGTATGACT
GCCAAAGTTGTAAATTCATATTGTCAGAAATTAAATTTAACAACCAAAGTCCCTCAGAAG
GTTACGAAAATTAAAGTTAGCAAATACAAAACTGTACCAATTAGCAGTTACCTGAAGGTA
AGTTCTCAGGTATTAATGAATAATAAATTAAAACAGCCACCTTCATTAAATATATCTGCT
AAGGTACAAGGAAGGGGTGCAAAAATATGTTCCTCATTTGTTCTGGATAATAAAAACCGT
TATAAGTTTGTGAAATCAAAGGTATCTGTTTCAATAGTGGATAATGTTAAACAAACTCCC
ATGAAATTCAAGAAGAATGTATCTTTAAATAATTCAAAGATAACCGTAGGGAAGGCCAAA
TTTAAGGTCAATAATATACCCTGCAGGTTGTTCACTAAATATGGTAAATGTTTAAGAAAA
GATTATGGAAAGTGCGAATTTTTGCACGATAAGAAACATGTCTCGCTTTGTAGAAAATTC
ATAAAGGGCATCTGTCACGACGGTAATTGTACTCTATCGCATGAGCTATCAACGAAAAAG
ATGCCGACTTGTTATTTTTATTTGAGAGGTATGTGCACAAAACAAAACTGCCCCTATTTG
CATGTTAAACTTAATGAGAAAACTAAGATATGTCAAGACTTCGTCAAAGGTTACTGTGAG
AAGGGTGATAATTGTCCATTCAGACATGTGAAGGTGCAAGAATCGAAGACAACCAGGAAA
ATTAGACTCAAGTCCGGTCCAAAAAATCAGCAGACCAAAGGAAAGAAGCTAAAAGACATA
CAAAATAAAATAGTTGATAGAAAAAATGTAAATAAATCAAATGAAGAGGAAATGGATATG
AAAGACAAGAGTGACAGCGATCATAGGTACTACGACGACGTTGTAAACAATGAGGGTACT
TGCGAAATTATAAAGCCCACCAGGTGTAAGTTAGGCGTCTTGCCTTCTTACATACAACTA
TAG
Protein sequence:
MSGLSFISQYGDDEDSQSDENDDCKIPKIKLPTPNLSEVSVVSTEEHIDEPSLHGGRLRS
FPHVRGNWPSFIYIEYPEQDHLHKTINKLSNFVSSLNILCNRCDGIHLSLSKTFTIQYHM
IKPLSSALQEVLGYIESFELFFDSIEVYCNEEKTRTFIAIKADIYSSKILANITDKIDGI
LEDYKLPKFYKDPSFHISILSVNGNKKNDILRIVEDLNKILIRNPQTSTGPLQYKTAYVN
RHFSQETYQNQVHQPQDDVNNRKIYVNPNFIAPTNHHQPYDNVRTNVSHNYIGNLVPNMY
SVSNIEQKHSFINDNLEIKNSLYSIRLSRNTGEPSAKENLKVTESFTNSLEAPLTKSRYS
LVRKSKPISKSIAITSNSYKDNTIQNTHNVLSHASTSCMTAKVVNSYCQKLNLTTKVPQK
VTKIKVSKYKTVPISSYLKVSSQVLMNNKLKQPPSLNISAKVQGRGAKICSSFVLDNKNR
YKFVKSKVSVSIVDNVKQTPMKFKKNVSLNNSKITVGKAKFKVNNIPCRLFTKYGKCLRK
DYGKCEFLHDKKHVSLCRKFIKGICHDGNCTLSHELSTKKMPTCYFYLRGMCTKQNCPYL
HVKLNEKTKICQDFVKGYCEKGDNCPFRHVKVQESKTTRKIRLKSGPKNQQTKGKKLKDI
QNKIVDRKNVNKSNEEEMDMKDKSDSDHRYYDDVVNNEGTCEIIKPTRCKLGVLPSYIQL