New model in OGS2.0 | DPOGS207381  |
---|---|
Genomic Position | scaffold604:+ 14861-15323 |
See gene structure | |
CDS Length | 354 |
Paired RNAseq reads   | 154 |
Single RNAseq reads   | 526 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008878 (3e-43) |
Best Drosophila hit   | CG17996 (1e-31) |
Best Human hit | COX assembly mitochondrial protein homolog (1e-24) |
Best NR hit (blastp)   | Cmc1 protein [Bombyx mori] (6e-41) |
Best NR hit (blastx)   | Cmc1 protein [Bombyx mori] (1e-41) |
GeneOntology terms    | GO:0046872 metal ion binding GO:0005739 mitochondrion |
InterPro families   | IPR013892 Cytochrome c oxidase biogenesis protein Cmc1-like |
Orthology group | MCL14818 |
Nucleotide sequence:
ATGCCGGAAGCGACAGTCCTACCAAAAAAATTTTCAGATGGACCTCATGGACTTGGAGAT
CCTGAGGACAGATCGTTGAGAAAAGTTGAAGTCGAAGTAGTTATTCCAAAACTAATGAGG
GAAAAGGCTAAAACTGAAAAATGCATCAAGGAGGTTGAAGATTTTAATAAATGCTGTAAA
GCCTCGTCTCTTTTTATGGTTTTTAAATGTAGAGATGAAAACTCAGCGCTAAAATCTTGC
ATGGCTAAATGGTATAATGATGAGAAATTTAAAAATGTATGCACTGAGGAATATCTACAG
CAAAGAAGTGAATATAGAAAAACAGGTATAAAGAAATCAATAAGAAGAGTTTGA
Protein sequence:
MPEATVLPKKFSDGPHGLGDPEDRSLRKVEVEVVIPKLMREKAKTEKCIKEVEDFNKCCK
ASSLFMVFKCRDENSALKSCMAKWYNDEKFKNVCTEEYLQQRSEYRKTGIKKSIRRV