New model in OGS2.0 | DPOGS207390  |
---|---|
Genomic Position | scaffold604:+ 90030-92357 |
See gene structure | |
CDS Length | 2328 |
Paired RNAseq reads   | 792 |
Single RNAseq reads   | 1945 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008884 (0.0) |
Best Drosophila hit   | CG1109, isoform B (0.0) |
Best Human hit | WD repeat-containing protein 33 isoform 1 (6e-174) |
Best NR hit (blastp)   | PREDICTED: similar to wd-repeat protein [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to wd-repeat protein [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0005634 nucleus GO:0003674 molecular_function GO:0008150 biological_process |
InterPro families    | IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup |
Orthology group | MCL12759 |
Nucleotide sequence:
ATGCGTAAGACTGTAGACTATAATTCAGCTATTATAAAAGCTTTAGAATGTCGCGTTTGG
CAGAGGGATTGGCGGGATAGGCATGCGTTACAACCGGATGCTATGTACACACCTGATCTA
TTACCACCACCTTCATACCCAGACAATCCAATAAATGCTGTAACCACACGATTTGTTAAG
ACTGCAACAAATAAAATGAGATGTCCAATATTCGCTGTTGCCTGGACACCTGAAGGTCGG
AGATTAATAACTGGAGCTTCATCGGGTGAATTTACTTTATGGAATGGTCTTACATTTAAT
TTTGAAACAATTTTGCAAGCACATGACTCTCCAGTCAGATCTATGGTTTGGTCTCATGGA
GAGGGCTGGATGGTAACAGGAGACCATTCCGGCTTCATAAAATATTGGCAAAGCAACATG
AACAATGTTAAAATGTACCAAGCCCATAAAGAAGCTGTTAGAGGTATAAGTTTTAGCCCC
AGTGATGCTAAGTTGGTAACTTGTTCTGATGATGGTACATTGCGCATATTTGATTTCTAT
AGATGTCAAGAAGAGAGAATATTAAGAGGCCACGGAGCTGACGTAAAATGTGTACAGTGG
CATCCTACAAAAGCACTTATTGTGTCAGGAAGTAAAGATAATCAGCAACCAATAAAATTG
TGGGATCCTAAATCTGGTACGGCATTGTGTACTCTTCATGCACATAAATCAACAGTTATG
GATTTGAAATGGAATGATAATGGAAACTGGTTAATAACTGCATCTCGTGATCATTTGTTA
AAGCTCTTTGATATTCGCAAGTTAGGCACAGAAGTACAAGTGTTTAGAGGTCATAAGAAA
GAAGCATCAAGTGTTGTATGGCACCCAACACACGAAGGACTGTTTTGTTCTGGTGGCTCC
GATGGATCTATTTTATTCTGGAATGTAGGTACTGATAAAGAAGTAGGATGTATAGAAGGC
GCCCATGAATCAATTGTTTGGACTATGGCTTGGCATCCACTCGGTCATATATTGTGTTCA
GGATCAAATGACCACACCTCAAAATTTTGGACGCGCAATCGACCTGGAGATCAAATGAGA
GACAAGTATAATCTCAATACCCTACCACCAGGTGTACAAGACGATAATGACCTTGAAGAG
CCAGCAGCAATCCCTGGAATGGGTCCTGAAGATAAGGTTGATATATTCTCATCTGACACC
GATAAGGTGATTCCTGGATTAGATTTAGATACTACATTAATTCCAATGGAGTTTGAGAAG
AAAGTTAAGAAGGTGCCTTATAGCAAACCTATTCCAAGGAATTTCCAAGCCCAGTGGAAT
CATGGCCCAGCTGTAGACGATGCAGCTGCCGAGGCATTTACACAGGCCCTAGTTGAATCT
GTTCCAGGAGCTGTTCCACTGCAGCAGATCAATCCTTCTGCCATCTTTATTTATGGTAAA
CTAATACCAGTAGAACCTGGCTCAAAATTAGAAAAAGCTATAACAGAAGGTCATGTTGCA
CTAAAGAGATACATAGCTACTGGCGAAATTGAAGAATTGGATGAAATGATGGCCCATCTG
GAGGAGGACGCAGACGACGACAACTTCCCTCCATTTGAATATCCAACTCAAGAGAATAAT
GAAAATGAAGGTGAGAAAAGCGAAAATGAAAATGCGGAAAAAGAAAACTATGAACAAGAA
GAATATTTTAACAATGAGATGGAAACTAGTGAACAGAATCCAGAAGATTATAATAATTAT
GATAATGGACCCGATATGTCAATGATGCCTCCCATGGTTCCTATGGGTAATATGCCACCA
ATGGGTTTGTTAAGACCTCCAATGAATATGGGACCTATGAGACCGCCTTTAGGGCCGCCA
CCACTTCATGCCATGCACATGCCACCACCACACATGGGAGGCATGCCACCAATGGGTGGA
ATGCCTCCTATGGGCCCCATGGGAAATATGCCTCCGATGGGCAATATGAACCAATTACCG
CCTTTCTCAGACAACGGCTACAATAAAGGACACTTTGAGGGTGGTTATGAAAGTAACCAG
TCGTTTTCACAAGAGAATAGTGAATATAATGAAGAAGAATCATTCGACCAAAATTATGAG
GAGGAGAATTATAATGAGGAAGAGGACGGTGATGATAGCTATGGAAGAAATCAGAGGTGG
ATTGGTGGTTTTAGAGGCAGGGGTCAAGAGAGAAACAATAGAGGTCGAGGTCACGACCGT
GGGAGAGGTCAGGATCGAGGTCGCGGTAGAGGTATGAATGGTTTCGGTAGGAATATGCGC
AGAGGAGCTAATAGGGTTTTTAGAAGAGGTAGCAAACAAACTAACTAG
Protein sequence:
MRKTVDYNSAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAVTTRFVK
TATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDSPVRSMVWSHG
EGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDAKLVTCSDDGTLRIFDFY
RCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALCTLHAHKSTVM
DLKWNDNGNWLITASRDHLLKLFDIRKLGTEVQVFRGHKKEASSVVWHPTHEGLFCSGGS
DGSILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFWTRNRPGDQMR
DKYNLNTLPPGVQDDNDLEEPAAIPGMGPEDKVDIFSSDTDKVIPGLDLDTTLIPMEFEK
KVKKVPYSKPIPRNFQAQWNHGPAVDDAAAEAFTQALVESVPGAVPLQQINPSAIFIYGK
LIPVEPGSKLEKAITEGHVALKRYIATGEIEELDEMMAHLEEDADDDNFPPFEYPTQENN
ENEGEKSENENAEKENYEQEEYFNNEMETSEQNPEDYNNYDNGPDMSMMPPMVPMGNMPP
MGLLRPPMNMGPMRPPLGPPPLHAMHMPPPHMGGMPPMGGMPPMGPMGNMPPMGNMNQLP
PFSDNGYNKGHFEGGYESNQSFSQENSEYNEEESFDQNYEEENYNEEEDGDDSYGRNQRW
IGGFRGRGQERNNRGRGHDRGRGQDRGRGRGMNGFGRNMRRGANRVFRRGSKQTN