| New model in OGS2.0 | DPOGS210693 |
|---|---|
| Genomic Position | scaffold946:+ 37613-44793 |
| See gene structure | |
| CDS Length | 3177 |
| Paired RNAseq reads | 5349 |
| Single RNAseq reads | 14305 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006308 (3e-11) |
| Best Drosophila hit | chaoptic (0.0) |
| Best Human hit | insulin-like growth factor-binding protein complex acid labile subunit isoform 2 precursor (1e-22) |
| Best NR hit (blastp) | cell surface protein chaoptin [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG1744-PA [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0007156 homophilic cell adhesion GO:0042051 compound eye photoreceptor development GO:0005515 protein binding GO:0042052 rhabdomere development |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR000483 Cysteine-rich flanking region, C-terminal domain IPR001611 Leucine-rich repeat |
| Orthology group | MCL15085 |
Nucleotide sequence:
ATGATACTTGTTGCATACACTACCAAACAAAATATTAACAAAACCAAAACTTTGTATGTT
AATCAAATCTTAGTATGTCATATCAATTTAAAAGAAGATGCGTTCCGAAATGCAAAGATT
AAAACATTGTCTCTACGAGACTGCGGCGTCACGGACCTATCTCCAGCATCATTCGCCGGC
CTTGAAAACACTCTTCAGTCCCTAGATTTATCAGAAAACAACCTAACAATGATATCCAAA
TTCATGTTAAACAAGTTAGACTCGTTGCGGTTCTTGAACCTAAGAGAAAATAAGGTGGAC
ACGAATTTACTAGCAACGAATAATCCATCAGAGTACTCGACGCCATCGATAAATAACTTT
CAGTATAAGTTGTTCTTCTTGGACATCAGTGGCTCATCGTCTCTTGAAATTAGCTTGCAA
GATGTGAGAAGAATGCGTTCCCTCAGATATTTGTCTGTGAGTAAATTGATAAGACGCAGC
ATATCTGCAGAAGATTTCCTAGAATTCGGCGTGGAATTGGAGGATCTAAAAATAATCGGA
AGCACTATCAATCGAATCGAAGCGAGCGCCTTTCAACATGTACGGACTATAAAGTCCTTA
GATCTGTCTGAAAATAACATTGACTTTATAGACCCATTCGCGTTTGCGGAGTTACATAGC
TTGACATCATTGAAATTAGCCAATGGATTAGCAGATTCCGTAAAAATATTGCCATTTGAA
CCTTTGAAAGCACTTATAGAATTGCAGGATTTGGACGTTAGTAATAACAAATTGAGGAAC
GTCCCAGACACATCTTTCCACTTCTTATATAAGTTAAAAACATTGAACCTTCAAGATAAT
CTCATTGATCACTTCTCTAAAGGAACATTACAGAGTGACATACATCGACAGCTAGAAAGC
GTTTCTCTATCGCTAAACCAAATGCAACGAATTGATCAACATACATTTGTCAATTTACGA
GAATTACAGGAAATTTTAATCGAAGATAATCTAATAGAAACAGTGCATAGACGTTCCTTC
ACAAGTTTAGATAACCTGAAGGTGATTCGATTAAGAGGAAATATTATTACTGAAATTAGT
GAAGAGGCATTCCAAAATCTACCGGCCTTGAAAGAGTTAGATATATCATTTAATCAATTG
GAGACGTTCAAGTTTTCGATATTTGATCAAGTTGGATCTGCGACGGCCTTGAAAGTAAAC
GTGTCATACAACAGAATAGTTTCATTGACTGATTCAAATGCTGTCAATTTCTTCTCTTCA
AACTTTTATCCTCCACCTAAAGCGCAAAGATTAGTTTCTGAGGATCCCAGTCCTCTGCGT
ATAGAAAGAGGACTTGGCACGGTATCAGTGAATATAAGAGTTTTGGACTTCTCACACAAT
AACATTTCATACATCGCGCCATACTACTTCAGACACGCGGACCTGACGTTATCCGAGTTG
CACCTCTCCCACAATATGATCCGTAATATAACACGAGAAGTGTTTGGGTCGATGCTAATG
TTGCAATACTTGGATTTATCGCATAACCAAATATTCCACATGGAGTATGACTGTTTTAAG
AAAGTTAAAAGATTGCAAATAATAGACTTGTCCCATAATCACCTGTTCGATACACCGGTG
GAAGTGTTCCACGAGATGCAGGGACTTACTACAGTGGATCTTTCGGACAACAACATCAAA
AACTTAGCAGATAATCTCATCATATCTCCAGCTTTAGAGAGGCTAGACCTATCTGACAAT
GATTTGTCACGAATACCAACGAATTGTTTATCTCCGGCTGCTGCTATTAATCTAGTAGAA
CTAGATTTGAGCGGGAACAACATACCCGCTGTAGCTATTGCTGACTTAGTCCAAAGATAT
AGGCACGACGACTGGCCCGAGGAACCGGACTACAGTGACGAATACATGTACCACACGGCT
AGGCGCGACCACGCCAGAGTGTTCCATCAAAAAAAACAATACCCGCAGAACATATTGTTT
AAGTCGCTTGCGTGGTTGGATTTGTCTGACAATCACTTGGTGAGAGTTGAAAGCGGTTCT
TTTGCTGCTTTACCAAAACTCCGATGGTTGGATTTAAGTATGAATATGCCCTTTAACAAC
AATGACCGCGGAAGCAGTTTATTTAAAGGTTTAGAAAGAAGATTATCTCATTTGGGACTA
AAGAATGTTAGTCTCACAAATATCCCATCAATGCCGTTGCCGAAGTTAAAAAGCCTAGAC
CTATCATACAACAACTTTCCCTCCATTCCGACCGACATGACGGCAAACTTGACTCGTCTC
AGAGCTTTGGATTTGTCTTATAATGATTTGACTAATGTTCCCGTAGCGACTCACTCCCTC
AGCGAACTTCGTTGGTTGTCTCTATCTGGGAATCCAATCACTGCCCTTATGAACACTAGC
ATGTACGGCGTGTCTCCGAGACTAGAATATTTAGACGTAACTCACCTAAAATTGAGTATA
CTAGAGGCCGGGGCGTTCAGCAAAATGTACGGATTACGCACTCTTAAAATATCTGTTAAT
GGAAATATAAGAGACTTCAATATTCCAAAGATATTGACACACAATGACGCATTGAAGAAT
TTGTATTTACATATAGACAATTCTCAAATCGATCTTGGCAAGGAGATGATTGGAGAACTT
CCTCCCAAGCTAAATAACATTACTATTGTTGGTAAAGCTTTGAAATTTTTGTCACAGAAT
CTGCTAGGTGGTGTTACATCTGAAACTTTGACTCTGACCATTTATAATACCAGCCTTGAG
GAAGTAGAAAGTGAAGTTTTTTGGAGACCAGGCCATGTAAAGAATCTAACCCTAGATTTG
AGGCATAATAATATAGCTAGGGTTCCCAATCCAGCGAGACATGAATGGCCGGGAGTACCA
AATTCTTTATTCCTTCACGACATATTTTTGTCTGGAAATCCTTTATACTGTGATTGTCGC
ATCGGTTGGGTTCAAGCGTGGGATCGCAAACGAAGACAATATTTGTGCGAGAGTCCCTCT
AGTTGTGTTGCTGTACGAGACGATCTCAGATTTGCGAAATGTCCTTCCCATTATAACAGG
ACTTTCAGTGACGTCATCGCGAAAGATTTAGACTGCACTTGGAGTAAAGGATTCCTGAAC
TTACCAAACTTATACATAATTACGGCAATATCTATCATGACATGCCTCTACATTTGA
Protein sequence:
MILVAYTTKQNINKTKTLYVNQILVCHINLKEDAFRNAKIKTLSLRDCGVTDLSPASFAG
LENTLQSLDLSENNLTMISKFMLNKLDSLRFLNLRENKVDTNLLATNNPSEYSTPSINNF
QYKLFFLDISGSSSLEISLQDVRRMRSLRYLSVSKLIRRSISAEDFLEFGVELEDLKIIG
STINRIEASAFQHVRTIKSLDLSENNIDFIDPFAFAELHSLTSLKLANGLADSVKILPFE
PLKALIELQDLDVSNNKLRNVPDTSFHFLYKLKTLNLQDNLIDHFSKGTLQSDIHRQLES
VSLSLNQMQRIDQHTFVNLRELQEILIEDNLIETVHRRSFTSLDNLKVIRLRGNIITEIS
EEAFQNLPALKELDISFNQLETFKFSIFDQVGSATALKVNVSYNRIVSLTDSNAVNFFSS
NFYPPPKAQRLVSEDPSPLRIERGLGTVSVNIRVLDFSHNNISYIAPYYFRHADLTLSEL
HLSHNMIRNITREVFGSMLMLQYLDLSHNQIFHMEYDCFKKVKRLQIIDLSHNHLFDTPV
EVFHEMQGLTTVDLSDNNIKNLADNLIISPALERLDLSDNDLSRIPTNCLSPAAAINLVE
LDLSGNNIPAVAIADLVQRYRHDDWPEEPDYSDEYMYHTARRDHARVFHQKKQYPQNILF
KSLAWLDLSDNHLVRVESGSFAALPKLRWLDLSMNMPFNNNDRGSSLFKGLERRLSHLGL
KNVSLTNIPSMPLPKLKSLDLSYNNFPSIPTDMTANLTRLRALDLSYNDLTNVPVATHSL
SELRWLSLSGNPITALMNTSMYGVSPRLEYLDVTHLKLSILEAGAFSKMYGLRTLKISVN
GNIRDFNIPKILTHNDALKNLYLHIDNSQIDLGKEMIGELPPKLNNITIVGKALKFLSQN
LLGGVTSETLTLTIYNTSLEEVESEVFWRPGHVKNLTLDLRHNNIARVPNPARHEWPGVP
NSLFLHDIFLSGNPLYCDCRIGWVQAWDRKRRQYLCESPSSCVAVRDDLRFAKCPSHYNR
TFSDVIAKDLDCTWSKGFLNLPNLYIITAISIMTCLYI