| New model in OGS2.0 | DPOGS201417 |
|---|---|
| Genomic Position | scaffold570:- 11208-14529 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 219 |
| Single RNAseq reads | 651 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002571 (7e-12) |
| Best Drosophila hit | CG12299 (5e-42) |
| Best Human hit | zinc finger protein 510 (2e-50) |
| Best NR hit (blastp) | PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein 7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48) (Zinc finger protein dp) (ZNF-dp) [Acyrthosiphon pisum] (9e-56) |
| Best NR hit (blastx) | hypothetical protein LOC77117 isoform 1 [Mus musculus] (4e-59) |
| GeneOntology terms | GO:0005622 intracellular GO:0005634 nucleus GO:0008270 zinc ion binding GO:0003677 DNA binding GO:0046872 metal ion binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL24031 |
Nucleotide sequence:
ATGGCTCACATCTTGGATTTCAAGAAAATATGTCGCGCCTGTTTATCTGATGCTGGACCT
CTAAAGGATTTGTTTACGGCTTGTTCTGCTGGAGTCTTTAAATACTGCACTTCTGTGGAA
ATCGCAGATTCGGATGCCCTCCCAAAATTAATATGTCAAACATGTTTGGATTTACTGAAC
AAACTGTACTACTTCAAGCAAGTCGTTGTGAGATCCAACGTTATACTGAAACAGCAATGC
AGATTACTGAATTTGCAGACCAAACCTGATCAGACAAGCGAAGGGAATGATATAGTAGAG
GTAAATATAACAGAACTGAATGAAGAAGTCACGATGCATGAGAACAACATGAACGAAAGT
ATGGATGGAACAGAGAAGACAGAAAAACCATCAGCTGATGCAATATTAATTAGTCAAATC
CTGCAACGTCGCCGGAGACGCGGCCCTGGTCGTCCGCCGAAGGATCCAGACGGGCCCAAG
CGGAGACGGGAACGGATGAAGTGTATGAAATGCGGCAAGAGCTTCCAGAAGTACGAGAAC
TTCGAAGCTCACATGCGCGGACACTTCGGGAAGAAGCCAGATATAAAGTGCAAGCATTGC
GACAAGGCGTTCCTGTCCCTCCGCAGTCTTAGCAGCCACGTGAGGATTCATACAGCGGTA
CGCAAATATCAATGCCTGAGCTGCGGCAAGAGCTTCGCATATTTGAATGTGCTCAAAAAT
CACGAGCTGATACATGCCGGTATCAAGAAACATCAGTGTCACATATGTGACGCTAAGTTC
GTGCAGGCTTACAATCTCAAGATGCATCTAGAAACTCACAATAATCAGAAGAACTATAGC
TGTTCACAGTGCGGAAAGAAGTTTGCTCAGCCGGGGAACCTCAAGATACACCTCATAAGG
CACACTGGCATCAAGAACTATGCATGTACCATGTGTGAGATGAGGTTCTATATAAAGGCT
GATCTGGTGAAGCACATGCGTTCACACTCCGCCGAGAAACCTTTCTCCTGTCAACTTTGT
GATAAAACTTTCAAAAGCAGAAGCTTTCAAGCAATACATATGAGGACGCATACAGGAGAG
CGTCCGTATGCCTGCGACCTGTGCCCCAAAAAATTCATGGCTAGAAAAGACTTGAGGAAC
CATCGGATGATCCACACGGGGGAGAAACCGCACAAATGTCAGCTGTGCAACCAAGCTTTC
ATACAGAAATGTGCACTGAACAGACACATGAAGGGTCACGGGAAGGCCAATGAAGATGCA
CAGAATCTCATCAGAGCACAACTACCGCCTGTTAATAATACACCTCTTCCAATGTCATAC
ACACAGTGGCATAACTGA
Protein sequence:
MAHILDFKKICRACLSDAGPLKDLFTACSAGVFKYCTSVEIADSDALPKLICQTCLDLLN
KLYYFKQVVVRSNVILKQQCRLLNLQTKPDQTSEGNDIVEVNITELNEEVTMHENNMNES
MDGTEKTEKPSADAILISQILQRRRRRGPGRPPKDPDGPKRRRERMKCMKCGKSFQKYEN
FEAHMRGHFGKKPDIKCKHCDKAFLSLRSLSSHVRIHTAVRKYQCLSCGKSFAYLNVLKN
HELIHAGIKKHQCHICDAKFVQAYNLKMHLETHNNQKNYSCSQCGKKFAQPGNLKIHLIR
HTGIKNYACTMCEMRFYIKADLVKHMRSHSAEKPFSCQLCDKTFKSRSFQAIHMRTHTGE
RPYACDLCPKKFMARKDLRNHRMIHTGEKPHKCQLCNQAFIQKCALNRHMKGHGKANEDA
QNLIRAQLPPVNNTPLPMSYTQWHN