| Genomic Position | scaffold5317:+ 418-5608 |
|---|---|
| See gene structure | |
| CDS Length | 549 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 0 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010428 (4e-18) |
| Best Drosophila hit | glass, isoform B (1e-12) |
| Best Human hit | zinc finger protein 624 (2e-13) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_121306 [Branchiostoma floridae] (8e-18) |
| Best NR hit (blastx) | zinc finger protein c2h2, putative [Pediculus humanus corporis] (4e-19) |
| GeneOntology terms | GO:0005634 nucleus GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0005575 cellular_component GO:0003674 molecular_function GO:0045449 regulation of transcription GO:0046872 metal ion binding GO:0006350 transcription GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0003677 DNA binding GO:0008150 biological_process |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type |
| Orthology group | ND |
Nucleotide sequence:
ATGAACACGCAAACAGAGCCGTTGGACCTCTCGATGAAAAGGAAGCCGGCGAAGCTTGGC
GTCGTTGACTTAAGGTTCCTGGCCGGCCTCAATGAACACTTGGTGAAATTATACGAGCAG
ACGTACGCGGACGGGAAGAGAGCCCTGGGGCTTCAACAGAGGAATGGGATCAAAAACATC
CTGCCGTGTCAAGTCTGCTTCAAAACCTTCGACCGCCCCTCATTATTGAAACGGCATATG
AGGACTCACACAGGAGAGAAACCTCACAAGTGTTCTGAGTGCGGCAAATGTTTCACGGCC
AGCTCTAACCTCTACTACCACAGAATGACTCATACTAAGGAAATAAAAATCGATAAACAG
GTATACCCCTGTTACGTACGCGCTAGATATTATAAAATAAATGAACATCGCCGGAGTGAC
ATCGTTGTATGGATAAAATATCATATAACGAGTGACGCCGCTGACTCCGCTCAACGAACA
CCAAGCCGTGTGAACCAGAGGATTCCTGATACCAAACAAGCTATGGAATCCTACCGGGTC
AAGTTGTAA
Protein sequence:
MNTQTEPLDLSMKRKPAKLGVVDLRFLAGLNEHLVKLYEQTYADGKRALGLQQRNGIKNI
LPCQVCFKTFDRPSLLKRHMRTHTGEKPHKCSECGKCFTASSNLYYHRMTHTKEIKIDKQ
VYPCYVRARYYKINEHRRSDIVVWIKYHITSDAADSAQRTPSRVNQRIPDTKQAMESYRV
KL