| New model in OGS2.0 | DPOGS213475 |
|---|---|
| Genomic Position | scaffold1949:- 31096-44663 |
| See gene structure | |
| CDS Length | 2802 |
| Paired RNAseq reads | 3634 |
| Single RNAseq reads | 8465 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004500 (0.0) |
| Best Drosophila hit | CG8494 (7e-117) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase 20 (1e-112) |
| Best NR hit (blastp) | PREDICTED: similar to CG8494-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG8494-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0004221 ubiquitin thiolesterase activity GO:0006511 ubiquitin-dependent protein catabolic process GO:0007399 nervous system development |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR006615 Peptidase C19, ubiquitin-specific peptidase, DUSP domain IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 IPR001607 Zinc finger, UBP-type |
| Orthology group | MCL11676 |
Nucleotide sequence:
ATGGACAAAGGTGTGACGTGTGAACATTTAAATAAACTTGTGGATTTCCTTGGAAAAGAG
CTATGGCAGTCGAAAGAGAGTCTGAACTGTTTCGACTGTGGATGTCCCGGCCCCAATCTC
TGGATTTGTTTGCAACCTGATTGTCACCATATAGGCTGTTCTGAAGTTAAAAATGATCAC
AGCACAATACACCAAAAGAACTTTCCATCTCATTGTGTTCATATGAATGTTACAACTGAG
AGGATATGGTGTTACTTGTGTGAGAAAGAGGTTCACATCAGAACAGCCATCGCAAAGGCA
AAGATGAAGCCAGACTCCACGACTGTGGAGGAGATGCTGGTGTCACGTACGGGGTCTGTG
GGGATCAGCGTCAACTCGGACGAGGACCTCGACCCTGATGACATGGAATACGAGGACCAG
AGACCCAGAGTGGTTGCAGGTCTAGTTGGTCTGCAGAACATGGGCAACACCTGCTACATG
AATGCGGCGCTGCAGGCCCTCAGCAACACGCAGCCGCTGACGTCATACTTCCTGGAGTGT
TCCGCAGCTGTGGCCTTGCTGGTGGGCGACAAGAAACCAGGGATTAGTCGAGCATACCAA
AAATTAATTAGAGAAATGTGGAGTAGGAAAACTAGAGGCTATGTTGTACCAAATGGTATT
CTGTATGGGATAAGGAATGTACATCCGATGTTCCGTGGGTACCAGCAACATGATACACAG
GAATTCCTGCGCTGTTTCATGGACCAGTTACACGAGGAACTCAAAGAACCGGTGTGGGAT
AGCGTGTCTGATGATAAACTGGCGTCAGAGGTCGAAGGTGACCAAGAGACGAGGAACATT
CACACAAGAAGACGGGCAGCTTCATCAGGAGCCTCAAATTCCTACAGAACCCTCGTTATC
TTCGGATGTAATCAGCTGTTCCTCGAATCTTCCACAGATAATGCTGAATATGGTGACGTG
GTCACATCTTGGGGTCCGACGGATTCAAGGGACGTGGGTTCCGAGTCGGAGTTGTCCAGC
GAGGCGGAGGAGAGGTACGAGACGTGCTCCAGCGGCGCCAGTGAAGCACCCGACGCTCAT
GAGAACACTTCCCCGTCCTGGAGTGGTGGTGGAGGTGACGGTGGGGGTGGTGCGAGGTAC
CGCAGCATCATCTCGGACGTGTTCGATGGGAAGCTGCTGTCGTCAGTACAGTGTCTCATC
TGTGATAGGGTGTCGACCCGTGTTGAGACATTCCAGGACCTTTCATTGCCCATTCCATCC
CGGGAACACCTCGCCATGTTACATCACACACCGCACACCGATCAGGACTCGTGGCTGTGG
TGGTTGTTTTCGTGGTTCCGCTCGTGGCTGTACGGCCCGGCCGTGTCGCTGCAGGACTGC
CTGGCGGCTTTCTTCAGCGCGGACGAACTCAAAGGCGACAACATGTATAGTTGTTCGAGA
TGCAACAAACTCCGTAACGGTGTGAAGATGTCGGGCGTGATCAGGCTCCCGGAGGTGCTG
TGTGTACATCTGAAGCGGTTCCGTCACGAGCTCATGTTCAGTGCCAAAGTGGCGGCGAGA
GTGTCGTTTCCGATCAACGATTTAAATATGGCCCCTTATTGTCATAAAGAGTGCACGTCA
TCCGTGTCCCGCTACTCTCTCTGTGCTGTTATATGTCACGCGGGCACGGCGGGCGGTGGT
CACTACACGTGCGTCGCCCGCGTCGACGACAGGTGGTACTCGTTCGACGACGCGTCCGTG
ACGCCGCTCACCACCCACCACCTAGCATCCTGCGAGGCCTACGTACTGTTCTACAGAAAA
ATAAATCCACAAATGGCAACCCTGAGACAAAAGGCGGCCGAAATATTAGAATCGTCCAAC
TCGGAACCGAACGACATTAAGTTTTACATCTCCAAGCAGTGGATTAATAAATTCAACACG
TGGGCGGAGCCTGGGCCCATAGACAATAGTGACTTCGTGTGCGTCCACGGCGGGGTTCGT
CCTGAGCGGGCGCCTCATCTGCCAGCCCTGGCTGCCCGTCTCCCGCAACCACTATGGGAC
TTCCTCTACCATCAGTTCGGCGGTGGACCGGCGGTGTCTCACGCCCACGAGTGTGGAGTG
TGTGCGCGAGCTCAGCATAGACTCAGGGCGAGGAGAGCCAGGGAACTCACAGCCTTCGCT
GAACTACACGCCATGTTCCAGGACCAGGAGCGCCCTCTAGCGGTGTTCGCTATCAGTATG
GCGTGGTTCAGACAGTGGCAGGCGTTCGTCCGGGACAAGGCGAGACACCCGCCGCCACCC
GTCGACAACACGTCCATCGTTGTTAAACAGGAAATCGAGGGGATCGTGTCATATGTACTG
AAGCCGGGTTCGGATCACGCGCAGCTCAGCGAGGAGTTGTGGAGGTTCTTCACCGATATA
TACGGCGGAGGTCCCGAGGTCCGGCTGTCAGCACCGCCGCCGCCGCGGGTCACACGATCC
TCCAGGAACTACTCCGAATCGGACAGAGAGGAATACTGCACTAAATCCTCGTCCGAGGTC
AACCTGTGGCTGCAGAAGAATCGCTCGCTTCAGAACATCAGCAGGCGGTACAAGGCGGAC
TCCGACGAGGAGATATACAGGAAGTACAAGCGGCATCCCACCAGCTACGACTCCGACGAC
GGCATGGAGATCAGCCCGACGCACAGCCACAACACTATCAGGATGGAGAACGGCCTGTCG
GAGCACGCCGCCCCCGACGACCTGAACCTAGACAGCATATCACTAAAGAATACACCAAAA
ACATGTAAAGTTAGAAAGACGAAACGCAGGACGGTCAAGTGA
Protein sequence:
MDKGVTCEHLNKLVDFLGKELWQSKESLNCFDCGCPGPNLWICLQPDCHHIGCSEVKNDH
STIHQKNFPSHCVHMNVTTERIWCYLCEKEVHIRTAIAKAKMKPDSTTVEEMLVSRTGSV
GISVNSDEDLDPDDMEYEDQRPRVVAGLVGLQNMGNTCYMNAALQALSNTQPLTSYFLEC
SAAVALLVGDKKPGISRAYQKLIREMWSRKTRGYVVPNGILYGIRNVHPMFRGYQQHDTQ
EFLRCFMDQLHEELKEPVWDSVSDDKLASEVEGDQETRNIHTRRRAASSGASNSYRTLVI
FGCNQLFLESSTDNAEYGDVVTSWGPTDSRDVGSESELSSEAEERYETCSSGASEAPDAH
ENTSPSWSGGGGDGGGGARYRSIISDVFDGKLLSSVQCLICDRVSTRVETFQDLSLPIPS
REHLAMLHHTPHTDQDSWLWWLFSWFRSWLYGPAVSLQDCLAAFFSADELKGDNMYSCSR
CNKLRNGVKMSGVIRLPEVLCVHLKRFRHELMFSAKVAARVSFPINDLNMAPYCHKECTS
SVSRYSLCAVICHAGTAGGGHYTCVARVDDRWYSFDDASVTPLTTHHLASCEAYVLFYRK
INPQMATLRQKAAEILESSNSEPNDIKFYISKQWINKFNTWAEPGPIDNSDFVCVHGGVR
PERAPHLPALAARLPQPLWDFLYHQFGGGPAVSHAHECGVCARAQHRLRARRARELTAFA
ELHAMFQDQERPLAVFAISMAWFRQWQAFVRDKARHPPPPVDNTSIVVKQEIEGIVSYVL
KPGSDHAQLSEELWRFFTDIYGGGPEVRLSAPPPPRVTRSSRNYSESDREEYCTKSSSEV
NLWLQKNRSLQNISRRYKADSDEEIYRKYKRHPTSYDSDDGMEISPTHSHNTIRMENGLS
EHAAPDDLNLDSISLKNTPKTCKVRKTKRRTVK