| New model in OGS2.0 | DPOGS213479 |
|---|---|
| Genomic Position | scaffold1949:+ 25677-27161 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 50 |
| Single RNAseq reads | 189 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004361 (1e-133) |
| Best Drosophila hit | pita, isoform A (8e-18) |
| Best Human hit | zinc finger protein PLAGL2 (3e-32) |
| Best NR hit (blastp) | PREDICTED: similar to lost on transformation protein 1 [Tribolium castaneum] (2e-51) |
| Best NR hit (blastx) | PREDICTED: similar to lost on transformation protein 1 [Tribolium castaneum] (4e-52) |
| GeneOntology terms | GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0046872 metal ion binding GO:0005634 nucleus |
| InterPro families | IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like IPR007087 Zinc finger, C2H2-type |
| Orthology group | MCL24418 |
Nucleotide sequence:
ATGGCCAGTCCGCCACCGAACCCTAGAGCAGGTGCGGAGAGCGGCTCCCAGTTCACGGAG
GAAACGGGCGGCCCACGCGCGGCCGCCCCGCAGAAGAAGTTCATAGCACCGCCTGCCTCG
CAGCTGCCAACCAAGTTGGAGTACGTCGCTCGCGGAGGAACGGGCCGCAGCGTCAAGCAC
ACCTTCCGAACAGTCAAGTTCGCTCGCAGAGTGCCCACGCTGCCTCCCAAGAAGCCCGAA
GGTGGGGCGGGCGGCGCGGGTGAGGCGAGCGGCAGCGGCGCCTCGGCCGAGCGCCGCCCG
CGTCGCGACCGCAGCAAACGGCATGTCTGCACCACTTGCGACAAACGCTTCTCCAGCCCC
GGCAAGCTGAGTCAACACGTTCTCTCTCATACTGGTGAGCTCCCGTTTTCGTGTGATTTA
TGTGACAAGCGCTTCAATTCTAAATTTAAACTAGTGCGTCACAGTCTCATCCACAGTGAG
TCTAGAGCCTTCGCGTGTACCGTCTGCGCGGAGGAAGGCAATTTACAGTGCAAGATTTGT
GATGAAGTGTTCAATTCGAGACAAGAAATTGTTAACCATCTTAAAGTTCATACAGGGAGT
CGAGCGCCCAAAAGTGACACTGATAAGAAGTTTACCTGTGATCATTGTGACAGAAGGTTT
TTTACAGCAAAAGATGTTAGACGACATCTTGTGGTTCACACAGGAAGGAGAGATTTTTTA
TGCCCTCACTGCCCACAAAAGTTTGGCCGTAAAGATCACCTGGTCCGTCATGTTAAGAAT
GCACATCCCGAGGAGTCATGGAAATCAGCAGCTGTGGGTACATCCAAAGACCCACCGCCA
GAAGCTACCTCATTTGAAGAAACTTATACAGAATATAACATTGAAGAAACAGATTTCAAC
CTTTGGAAGACCATAACTCCTAAAGAAGAAGTACCAGAGGGACGGACAGAGGTCCCGGCT
TCTGATATAATAGTAGAAATACCAGATTTAGGGATCAAAGTGGAGCCTTTAGATATAAAG
TTAGAAAATCCTCAATCTCCCAGTGAAATACTCGAATATCCAGTAGTTTATATGACCGAC
TTGCCATATATAACACAACCAATTCGAGATCCTATTGATGTGCATTTACTTAGTTCTGGC
AACGTTCAATCAATATTGTTGGACCCTGGCGAGGGTCCTTCGGGATTGTCGAGTCAGATG
TTGGGGCTGTTGGAGGAGGGTGAACCTTCTTATCCTAGCGACGAGGGACGGGTGCAGCAG
AGGCTGCCGGCTTTCACGCAGGCTTTTCAGACCGCCCAGAGCCCTAAGCCTCCCCCGCCC
CCGCCCCCGCCGCACTAA
Protein sequence:
MASPPPNPRAGAESGSQFTEETGGPRAAAPQKKFIAPPASQLPTKLEYVARGGTGRSVKH
TFRTVKFARRVPTLPPKKPEGGAGGAGEASGSGASAERRPRRDRSKRHVCTTCDKRFSSP
GKLSQHVLSHTGELPFSCDLCDKRFNSKFKLVRHSLIHSESRAFACTVCAEEGNLQCKIC
DEVFNSRQEIVNHLKVHTGSRAPKSDTDKKFTCDHCDRRFFTAKDVRRHLVVHTGRRDFL
CPHCPQKFGRKDHLVRHVKNAHPEESWKSAAVGTSKDPPPEATSFEETYTEYNIEETDFN
LWKTITPKEEVPEGRTEVPASDIIVEIPDLGIKVEPLDIKLENPQSPSEILEYPVVYMTD
LPYITQPIRDPIDVHLLSSGNVQSILLDPGEGPSGLSSQMLGLLEEGEPSYPSDEGRVQQ
RLPAFTQAFQTAQSPKPPPPPPPPH