New model in OGS2.0 | DPOGS204412  |
---|---|
Genomic Position | scaffold406:+ 4229-7517 |
See gene structure | |
CDS Length | 1608 |
Paired RNAseq reads   | 497 |
Single RNAseq reads   | 1107 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007717 (1e-120) |
Best Drosophila hit   | CG4709 (2e-47) |
Best Human hit | zinc finger CCCH-type with G patch domain-containing protein isoform d (6e-26) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger, CCCH-type with G patch domain [Apis mellifera] (6e-88) |
Best NR hit (blastx)   | PREDICTED: similar to zinc finger, CCCH-type with G patch domain [Apis mellifera] (6e-71) |
GeneOntology terms    | GO:0008270 zinc ion binding GO:0005622 intracellular GO:0003676 nucleic acid binding |
InterPro families    | IPR000571 Zinc finger, CCCH-type IPR000467 D111/G-patch |
Orthology group | MCL16334 |
Nucleotide sequence:
ATGGAAGAGTTAGCTTCCTCTATAAATCAATATGAAGACCAACTCTCAGTCGTTAGACAA
GCACTGCAAGCTACCCAGGATGCTAATGAACGCGAATCTCTTTCTGTATTGCAATCAGAA
CTACAAGAGCTTATCAGTCTTACTAAGGAAAGTATGAACGTACAACAAAATGATAACAAT
CAATGTGACAATGCAACAGAATCTAATGGACTTGATGAAGAATATGCACTCTTTATGAAA
GAGATGGATGAAAGTGATACATCAAATGTTAAAGACCACAAAAACACTACAGAAGAGGAC
AAAAATAGTGATATAGAAGATGAACTGGCTAGTCTTCTTGGGATGAAATGTTCTGTGTAT
CATACACACACTTGGGGAGGTCAACCCACCTTACACAATGCTATGGTGGGATCTGTAGTG
CCTCGGCAAGAGGATGACCAATTTAGTGACTTACAAGTTCAGGTACTTTTTACACATCCA
ACACACACTGAAATGTTGCCATGCCCTTTTTTCTTGAACGGAGAATGCAAATTCAGTGAT
GAACAATGTAGGTACTCACATGGAAAACTGGTTCAACTATCCAGTTTAAAGGAAGCAATT
GAACCAAACTACGAAGGCTTAAAAGTAGGCAGCAGGATATTAATGAAACTTAAGCCACCA
GATGATGAGGATATGAGCACAGTTAAAAAGTCGACAGAAAAATATCATCTTTGGCAGAGA
GCTATAGTAATTGGTGTAGATTTAGATAAGAGGACATGTGTCGCTAAGCTAGAACACGGT
GGGAAGATTGGAGAGAAAAGAAAAGTTGTTTCAGATGAATTTCATTTGAAGTTTGAAGAT
TTTTTTCCTCTTGGATCTCAAGATGACAATGACACCGACTCGGACAGTATAAGTGACACA
GAGTATCCAGAGTTGAAGAGTAGCAAAAGAAATGATGACCACACCAATTTGATAGGAGAC
AATTTACATATTAATGCTCCCGCAATGGGGGAGTGGGAACGTCATACTAGAGGCATGGGA
TCAAAGATTATGTTATCAATGGGTTACATCCCGGGCACAGGCTTGGGTGCAGCAAGTGAT
GGCCGTTTGTTACCGGTTGAGGCTCACATCATGCCCTCTACAGCCTCCCTTGATAGGTGT
ATGGAATTGAAACAGAAAGCTTCGGACAAAGATGCATTTTTGGTTGAAAAGAGACTTAAA
AGATTACAAAAAAGAGAAGAAGAACGCAGTAAACGTGCCTATGAAAGGGAGAAAGAAATG
GAGAGAAGGAATGTTTTTAATTTCCTAAACAATACATTAGGTGATAAAGTTGATGTGGAT
ACAGAACAATCAAAAAGAGCACCAACGGTTGACGTTAAACAATCATCTAGCAAAGATTTG
AACATAGAAAAATTCAAGTTGGATGAAGATAGCAAGCGGATTGAATGCGAGATAATTAAA
CTAAATGGTTCATTAGCCAGATATCCATCACAGAGTAATGGCTACAGAAGCATTAGCATA
CAAATAGCAGAGAAAAAGAGAGAACTGGATCTGCTGAGAAAGAAAGAGAAGGAAATAACA
AAAGAACAAAACCAGAGGAAGGACAAGCAGAAGATGACGGTGTTTTAG
Protein sequence:
MEELASSINQYEDQLSVVRQALQATQDANERESLSVLQSELQELISLTKESMNVQQNDNN
QCDNATESNGLDEEYALFMKEMDESDTSNVKDHKNTTEEDKNSDIEDELASLLGMKCSVY
HTHTWGGQPTLHNAMVGSVVPRQEDDQFSDLQVQVLFTHPTHTEMLPCPFFLNGECKFSD
EQCRYSHGKLVQLSSLKEAIEPNYEGLKVGSRILMKLKPPDDEDMSTVKKSTEKYHLWQR
AIVIGVDLDKRTCVAKLEHGGKIGEKRKVVSDEFHLKFEDFFPLGSQDDNDTDSDSISDT
EYPELKSSKRNDDHTNLIGDNLHINAPAMGEWERHTRGMGSKIMLSMGYIPGTGLGAASD
GRLLPVEAHIMPSTASLDRCMELKQKASDKDAFLVEKRLKRLQKREEERSKRAYEREKEM
ERRNVFNFLNNTLGDKVDVDTEQSKRAPTVDVKQSSSKDLNIEKFKLDEDSKRIECEIIK
LNGSLARYPSQSNGYRSISIQIAEKKRELDLLRKKEKEITKEQNQRKDKQKMTVF