| Genomic Position | scaffold10684:- 744-3236 |
|---|---|
| See gene structure | |
| CDS Length | 2493 |
| Paired RNAseq reads | 630 |
| Single RNAseq reads | 1461 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002632 (2e-82) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase IPR005135 Endonuclease/exonuclease/phosphatase |
| Orthology group | MCL10254 |
Nucleotide sequence:
ATGGGGGACCTGAATGCCAAGGTTGGCACGGAAAACGTCGGCTGTCAAAGACACATGGGC
ACACACGGGCTGGGAGGCCGCAACGATAATGGAGAGAGATTCCTGGAGTTCTGCCAGGAC
AACGATCTTACCATCGGGGGGACATTATTTATACATGGTGATCACCACAAGTACACTTGG
AATTCACCCGATGGAGTCACCAAGAATCAAATCGACCACCTTGCTATCAGCGCCAAATGG
CGCTCATCACTGCTTGATGTCCGCAACCGTCGTGGCGCGGATATCGATAGCGATCACCAC
CTTCTAGTTGCCAAGGTACGACTCAAAGTAGCTGTAGCTCGGCCCACAAACACCACTACC
AAGGTTGGGAAACGATTTGAGATCAACAAACTACAGGACCCAGTCGTAGGTGAGGCCTTT
AGGTTATCACTACGAAATCGCTTCTCCGCCCTTGAAGCGGACCATTCATCTGTCAACGCG
GAGTGGAACTACATCAAAATGGCCTACACAGAGACCAGCTCCGTCGTTCTTGGTTACAAA
CGCCATGGACGCGAGGACTGGATGTCACAGAGAACTTGGAATCTCATTGAGGAGAGGCGC
AAGTCTCACCTTCAAATTCTGGCAACTATCGATGAGGCAGTGCGCGAAGACCTGAGGGTG
CAATATAGGCGCATACGCAAATCCATATACCGCAGTGCTCGCCACGATCGGCGAGTGTGG
GCGGAAAATGTGGCGGATTGCGCCCAACGCGCTGCCAACTCCGGTAATCTCAGAGAGATG
TACAAGGCGACGAGGATCTTGACCGGAAAACGGGCCTTGAAGAAGAAGCCCCTGAAGGAC
AAAAGGGGTGAACTGATTGCTACATCGGAGGGACAGCTCCAACGGTGGCGTGAACATTTT
GAGGAAATTTTCCAAGTCTCAAATAGCCCCATAACACCAACCACAGCTGCCAACCTGCCC
GCTGTAAGCCTCGATATCGACGAGTCTCCCCCCACTGAAGAGGAAGTAGTGAAAGCCATC
CAGTCGCTTAAGAACGGTAAAGCTCCTGGATACGACCTCATCACGGCGGAAATGCTAAAA
GCAGATATACCTACCGCTGCGAACGCGCTAACACCTCTTCTGCGGAACATTTGGTCAGCC
GAGGAGTTACCGGATGACTGGACTAAAGGGCTTCTCATCACCGTGCCTAAGAAGGGAGAT
CTCAGTGAATGCGCCAACTGGAGAGGCATTACCTTGCTTTCTACTCCGTCTAAAGTGCTG
TGCAAGATTATCCTAGACAGACTATCGAGGGCCATTGAACCTCTCCTTCGCAGAGAACAG
GCTGGATTCCGACCCAACAGATCGTGCACCGACCAGATTATTACCTTACGCATAATCCTC
GAACAAGCATCAGAATGGCAGAGGGAAATGTATTTGACCTTTGTGGATTTCGAAAAAGCT
TTCGACACGCTGAGATGGACAGGTATCTGGGAACGTTTACGTGAAGTTGGAGTCCCCGAC
AAAATAATCAACCTGATAAAAGCCCTCTACAGGAAATATTCCTGTAAAGTAATTCACAAC
GGTCTTTTGTCGGAGGACATACCAGTCAATGCAGGTGTTCGCCAGGGGTGTCTCCTTTCT
CCTATTCTCTTCCTTGTCGTTCTGGATGGTATCATGCAGAAAGTGACGAAAAGCAAGCGC
CGCGGCATAGAATGGGGACTGTCCAGCACTTTGGAAGATTTGGACTATGCCGATGACCTA
TGCCTGCTGAGCCATACACACGCCAACATGCAAACCAAACTGGACGACCTACGACGAGAA
GCATTAGAGATGGGGCTAAAAATAAACACGCGAAAGACCCAGGAGATGAGGTGCGGAGCA
ACAACCTCTCTGCCGTTGCTCATTGGCACAGAGGCTATAGAAAAAATCCACAAATACACC
TACCTAGGAAGCATAGTATCGGAGAGTGGAGGTGCCGAAGAGGACATCGCTTTGAGAATC
GCCAAATCAAGAGCAGCCTTCGCGCAACTCCGTCCTGTATGGCAGTCGCGGAAGCTAACC
AGGAGAGTTAAACTCAAAATATTCCGGTCCAACGTCAAATCCGTGCTGTTATACGGATGT
GAGACGTGGAAGGTTACTAAGGACATCTCGCATCGGCTTCAGGTCTTCGTCAATTGGTGT
CTTCGCCGTATTCTCGGTATTTACTGGCCCGAGAAAATTTCCAACGTTAATCTCTGGGAA
CGCTGCGGTGAGACACCGATTGACCTGCAAATCAAACGTCGCAAGTGGAAGTGGATCGGC
CACGCGCTCCGAAGGGATCCGGAACACATACCGAAACAAGCCCTAGACTGGACCCCTGAA
GGAAAGCGGAAACGTGGTCGCCCTAAGCAGACCTGGCGGCGGACGATCATTGCAGAGGTC
AAAAACATCGGCAAGACTTGGAGCGACATAAAAGGCGAAGCTCAAGATCGAACGAGATGG
CGACGTACTGTGGATGCCCTCTGCCCCATCTAG
Protein sequence:
MGDLNAKVGTENVGCQRHMGTHGLGGRNDNGERFLEFCQDNDLTIGGTLFIHGDHHKYTW
NSPDGVTKNQIDHLAISAKWRSSLLDVRNRRGADIDSDHHLLVAKVRLKVAVARPTNTTT
KVGKRFEINKLQDPVVGEAFRLSLRNRFSALEADHSSVNAEWNYIKMAYTETSSVVLGYK
RHGREDWMSQRTWNLIEERRKSHLQILATIDEAVREDLRVQYRRIRKSIYRSARHDRRVW
AENVADCAQRAANSGNLREMYKATRILTGKRALKKKPLKDKRGELIATSEGQLQRWREHF
EEIFQVSNSPITPTTAANLPAVSLDIDESPPTEEEVVKAIQSLKNGKAPGYDLITAEMLK
ADIPTAANALTPLLRNIWSAEELPDDWTKGLLITVPKKGDLSECANWRGITLLSTPSKVL
CKIILDRLSRAIEPLLRREQAGFRPNRSCTDQIITLRIILEQASEWQREMYLTFVDFEKA
FDTLRWTGIWERLREVGVPDKIINLIKALYRKYSCKVIHNGLLSEDIPVNAGVRQGCLLS
PILFLVVLDGIMQKVTKSKRRGIEWGLSSTLEDLDYADDLCLLSHTHANMQTKLDDLRRE
ALEMGLKINTRKTQEMRCGATTSLPLLIGTEAIEKIHKYTYLGSIVSESGGAEEDIALRI
AKSRAAFAQLRPVWQSRKLTRRVKLKIFRSNVKSVLLYGCETWKVTKDISHRLQVFVNWC
LRRILGIYWPEKISNVNLWERCGETPIDLQIKRRKWKWIGHALRRDPEHIPKQALDWTPE
GKRKRGRPKQTWRRTIIAEVKNIGKTWSDIKGEAQDRTRWRRTVDALCPI