New model in OGS2.0 | DPOGS203907  |
---|---|
Genomic Position | scaffold2:- 833005-836375 |
See gene structure | |
CDS Length | 2595 |
Paired RNAseq reads   | 2141 |
Single RNAseq reads   | 6380 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011180 (0.0) |
Best Drosophila hit   | gamma-coatomer protein, isoform C (0.0) |
Best Human hit | coatomer subunit gamma-2 (0.0) |
Best NR hit (blastp)   | nonclathrin coat protein gamma1-COP [Bombyx mori] (0.0) |
Best NR hit (blastx)   | nonclathrin coat protein gamma1-COP [Bombyx mori] (0.0) |
GeneOntology terms    | GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0030126 COPI vesicle coat GO:0005198 structural molecule activity GO:0005515 protein binding GO:0006886 intracellular protein transport GO:0000910 cytokinesis GO:0006911 phagocytosis, engulfment GO:0007424 open tracheal system development GO:0035149 lumen formation, open tracheal system GO:0005794 Golgi apparatus GO:0035147 branch fusion, open tracheal system GO:0009306 protein secretion GO:0008362 chitin-based embryonic cuticle biosynthetic process GO:0010883 regulation of lipid storage GO:0005801 cis-Golgi network GO:0030198 extracellular matrix organization GO:0035158 regulation of tube diameter, open tracheal system GO:0005783 endoplasmic reticulum GO:0007436 larval salivary gland morphogenesis |
InterPro families    | IPR016024 Armadillo-type fold IPR013041 Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain IPR009028 Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain IPR017106 Coatomer, gamma subunit IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal IPR014863 Coatomer, gamma subunit , appendage IPR011989 Armadillo-like helical IPR013040 Coatomer, gamma subunit, appendage, Ig-like subdomain IPR015873 Clathrin alpha-adaptin/coatomer adaptor, appendage, C-terminal subdomain |
Orthology group | MCL11508 |
Nucleotide sequence:
ATGAGCTCTTTTCGTCGTGACAAGAAGGAGGAAGAAGATACGGGAGGAAATGTCTTCCAG
AATCTTGATAAGACTGCTCTTTTGCAAGAGGCTCGTTATTTCAACTCCACTCCTGTAATT
CCAAAAAAATGTGTCCAGATCCTTACGAAAATTCTATACCTACTCAACCAAGGAGAGAAA
CTAACTACTCAAGAAGCCACAGATATATTTTTTGCGACAACTAAATTGTTTCAATCTAAG
GATGTTGTTTTACGTCGTCTTGTGTATTTGTGCATTAAAGAATTAAGCTCAATGGCACAA
GATGTAATCATCGTAACGTCCTCTTTGACCAAAGATATGACTGGCAAGGAGGATCTTTAT
CGAGCTGCAGCAATTCGTGCACTCTGCAGTATAACCGACAGTACTATGCTTCAAGCTATA
GAACGGTACATGAAGCAGGCAATTGTGGATAAAAATCCTGCCGTCAGTTCAGCTGCTCTT
GTGTCAGCTCTTCATCTATCTGCAACTGTTCCTGAACTGGTTAGGAGATGGGTGAATGAT
GCGCAGGAGGCAATTATGTCTGATAATGCAATGGTGTCATATCACGCCTTGGCAGTAGTA
GCAGGTGCCAGACGGAATGATCGTTTATCAACTGTGAAATTGGTAACAAAACTATCTCGT
TCACCTTTACGATCTCCATTTGCTTTATGCCTGTTAGTTAGATATGCTGCCAAATTAGCA
GAAGAGGATCAAACTGAAGCATCAGAACCATACTTGGAATTTATAGAATGTTGCTTGCGT
CACAAATCTGAGATTGTTGTTTATGAAGCTGCTCATGCTATTGTTAATTTGCGAAAGTCT
GCTAGAGATCTTGCCCAAGCTGTGAGCGTTTTACAAATTTTCTGTGGTTCATCCAAGGCA
ACCCTTCGCCTTGCTGGAGCTCGTACCTTAGCGAAGTTAACAACAAAACATCCAAATGCT
GTTGCAGCTTGTGCTGTTGACTTGGAAAACTTGATTTCAGATCCAAATCGCTCTGTTGCT
ACTTTAGCTGTGACAACTTTGCTTGCCACCGGAGCAGAAAGCTCAATTGATCGCCTAATG
AAGCAAATTTCTACTTTCATGTCTGAAATATCAGATGAATTTAAAATTGTAGTTGTTCGT
GCCATAAGGCGTCTTTGTACCAAATATCCAAGAAAGCATCAATCGCTGGCCTCATTTTTA
GCTGGGATGTTGCGTGATGAAGGTGGCGTACAGTACAAGACAGCAATTGCCGATGCGATT
ATTGCCTTGATAGAAGAAAATCCAGATGCAAAAGAGACTGGTCTGGCTCATCTTTGTGAA
TTTATAGAAGATTGCGAACATACATCACTGGCAGTTAGGATTTTGTATGTTTTGGGTCGC
GAAGGCCCTAAAGCTCGTCAGCCTTCTCGCTACATTAGATATATCTATAATCGAGTTATT
TTGGAATCTGGCCCAGTTCGAGCTGCTGCTGTATCTGCAGTTGCTCGCTTTGGCGCTACT
TGCGAGGATCTACTTCCAAATATTAGTGTATTGTTAGCTCGTTGTCAGCTTGACGATGAT
GATGAAGTTCGCGACAGAGCTATATTTTTTAATGCTATCTTGAATTCCAATGACCCTCAA
CTAATTAGCGATTATATCACAAACGTACCGACTCCAAACCCAGTTCTCTTGGAAAAAGCC
CTTCATGATCACCTTAAAATGAATCCTGATAAACCATTCAACATTCTGTCGGTTCCATCA
TCAGAACCCACCAAAGAACCTGAAGAAGCCCCTGTTCAAATTGAAACTCGTAAACAGCCA
GTTGTTTCTCTTGAAGAATTGTATTCTGAACAATTGAAAGTGGTTCCCGGCATTGAAAAA
CTCGGTCCACCATTTAAGACATGCAAAGCTATTGACCTTACTGAGCCAGAAACCGAATAT
CGTGTACGCTGTGTTAAACACATCTTTGCACGACATTTAATTTTGCAGTTTGAATGTTTG
AACACACTTAGCGATCAGCTTTTGGAAAAAGTCCGCGTCCGCCTGGAAACGGCTCCTGGG
TATAAAATCCTGTGTGAAGTTCCATGCGAGCAACTACCCTATGATAAACAAGGTAGTGTG
TTTTGTCTCTTAGAATTCCCTCATGGTCCGATAGAAACCTTGGGCACCTTTGGGGCTACC
CTTGAATTTTCAGTTCGAGATTGCGATCCTACCACTGGACTGCCTGATGGCGGTGATGGA
TATTCCGATACGTATCCTTTAGAGGAATTAGATATTGGATGCGCTGAGCAGTTCCGCGCT
CACGTGGCTACTGATGATTGGGAAGCTTCATGGGAAAGAACAGCGTCAGCCGCCGAAGCT
TCCGATACCTTTGTACTATCACAGTCAGATATTAATGAAGCAGCATCGGCAGTGTGCACC
CATTTAGGTTTACCTAAAGCTGCCATATCAGGTGACGCTGTAAAGGAAATTCGTGGTGGA
GGTTTGTGGCGCGAAGGCACACCGATGTTGGTACGTGCACGTCTGGTGGCATCTCAAGGG
TCTGTGACTATGAAACTCACGGCTCGCTCTCCTCGTGAAGATGTTGCTACTCTACTTTTA
GCTGCAGTTGGCTAA
Protein sequence:
MSSFRRDKKEEEDTGGNVFQNLDKTALLQEARYFNSTPVIPKKCVQILTKILYLLNQGEK
LTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSSMAQDVIIVTSSLTKDMTGKEDLY
RAAAIRALCSITDSTMLQAIERYMKQAIVDKNPAVSSAALVSALHLSATVPELVRRWVND
AQEAIMSDNAMVSYHALAVVAGARRNDRLSTVKLVTKLSRSPLRSPFALCLLVRYAAKLA
EEDQTEASEPYLEFIECCLRHKSEIVVYEAAHAIVNLRKSARDLAQAVSVLQIFCGSSKA
TLRLAGARTLAKLTTKHPNAVAACAVDLENLISDPNRSVATLAVTTLLATGAESSIDRLM
KQISTFMSEISDEFKIVVVRAIRRLCTKYPRKHQSLASFLAGMLRDEGGVQYKTAIADAI
IALIEENPDAKETGLAHLCEFIEDCEHTSLAVRILYVLGREGPKARQPSRYIRYIYNRVI
LESGPVRAAAVSAVARFGATCEDLLPNISVLLARCQLDDDDEVRDRAIFFNAILNSNDPQ
LISDYITNVPTPNPVLLEKALHDHLKMNPDKPFNILSVPSSEPTKEPEEAPVQIETRKQP
VVSLEELYSEQLKVVPGIEKLGPPFKTCKAIDLTEPETEYRVRCVKHIFARHLILQFECL
NTLSDQLLEKVRVRLETAPGYKILCEVPCEQLPYDKQGSVFCLLEFPHGPIETLGTFGAT
LEFSVRDCDPTTGLPDGGDGYSDTYPLEELDIGCAEQFRAHVATDDWEASWERTASAAEA
SDTFVLSQSDINEAASAVCTHLGLPKAAISGDAVKEIRGGGLWREGTPMLVRARLVASQG
SVTMKLTARSPREDVATLLLAAVG