Genomic Position | scaffold2:- 653156-654047 |
---|---|
See gene structure | |
CDS Length | 651 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 0 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | endonuclease-reverse transcriptase [Bombyx mori] (4e-32) |
Best NR hit (blastx)   | reverse transcriptase [Ostrinia nubilalis] (3e-31) |
GeneOntology terms    | GO:0005198 structural molecule activity GO:0005916 fascia adherens GO:0005515 protein binding GO:0016337 cell-cell adhesion GO:0030027 lamellipodium GO:0003964 RNA-directed DNA polymerase activity GO:0015629 actin cytoskeleton GO:0045296 cadherin binding GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
InterPro families   | IPR000477 Reverse transcriptase |
Orthology group | MCL10020 |
Nucleotide sequence:
ATGGTCCTAAAACAGCTAAAGAACAACAAGGCACCGGGTGAGGATGGAATTACTTTTGGA
ATTCTGAAAGCGGATGGATCACCGGTACTTAAAAGTCCTTCAGAAGCGCTTCAATTCTGT
CTTGTTCGAAGGTACCACGCCTGTGGTATAGAACAAGAGCGTATTGGTGTTATTCTTCAA
GAAAGGCTCAATGCAAATCGTCTCGAACGCAGGTTTGTTGATTTCCAGCCTCCCGAACAA
GCCCATTTCCGAAAAAGCTATAGTACTGTGGACTATATATGTACATACGCTGCGCCAGAA
ACAGAGTTCGACGGCGATTCCTACAAAAAGAGGAGTAAGACAGGGAGACCTTATATCTCC
GCTTTTGAAGTCGCCTTCAAGCTTCTGGAATGGGAAGGATTGGGCATCAATATTAACGGC
AAATACATTACTCACCTTCGGTTTGCCGACTATATAGTAGTCATGGCAAAGTCGATGGAG
GAACTAAGCACGATGCTCGAAGATCTCAATCGAGTCTCCCAATGGGTAGGTCTTAAAATG
AACATAGACAAACTCATGTCTAATGTGCATGTTGCACCTACTCCTATTATGGTTGAGAAC
TCGGTACTTGAAGTTGTTGACGCGTATGTATACCTAGGACAGAGAGTCTAG
Protein sequence:
MVLKQLKNNKAPGEDGITFGILKADGSPVLKSPSEALQFCLVRRYHACGIEQERIGVILQ
ERLNANRLERRFVDFQPPEQAHFRKSYSTVDYICTYAAPETEFDGDSYKKRSKTGRPYIS
AFEVAFKLLEWEGLGININGKYITHLRFADYIVVMAKSMEELSTMLEDLNRVSQWVGLKM
NIDKLMSNVHVAPTPIMVENSVLEVVDAYVYLGQRV