New model in OGS2.0 | DPOGS203916  |
---|---|
Genomic Position | scaffold2:- 547000-553664 |
See gene structure | |
CDS Length | 3315 |
Paired RNAseq reads   | 772 |
Single RNAseq reads   | 1980 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000494 (4e-42) |
Best Drosophila hit   | ND |
Best Human hit | centrosome-associated protein 350 (6e-10) |
Best NR hit (blastp)   | PREDICTED: centrosomal protein 350kDa [Rattus norvegicus] (1e-09) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC002404 [Tribolium castaneum] (1e-13) |
GeneOntology terms    | GO:0005815 microtubule organizing center GO:0005819 spindle GO:0005856 cytoskeleton GO:0005634 nucleus GO:0005737 cytoplasm |
InterPro families   | ND |
Orthology group | MCL39442 |
Nucleotide sequence:
ATGGATGCATCGGCATCCAACAAAACGAATCCCGAAAATAATTTATATGATCTTTATTTG
AAAATTGAAAATCCCATCTACTCGGCTCGAGTTCCATATAATAAACCTGTAGTGAAATAT
ACGCGCCTACCAGACTTCGATCTCAACACTAAAGAATCAACAAAAAGCGCTAAAAGTATA
AAAAGTGCTGGGTCATCACCTAAATTTAGCTTAAGTAAAAAGTTATTAAACCCAAAGGAA
AATGAAAAGGAGTGTACTCCCAAGAAAAACAAATTAAAAGAATACATCAACATTAAGGCA
CCACCAAAAACTGTTTTGGATAAGACAAAAAGAACTAAATCTCCACCTAATTTTAATCGT
AACAAAATGTCTCTTATCAAAGATATTAAAGACAAGGTTAGACCGGTTTCTGTAATACAT
GTGCCACTTGATGATCATTTTCGCAAACGTGATATTGGAACTGAGGCTTCAGAGGTCATC
ATGAATCAAGCTGTACATTCTATTAATAATGTCACTACAGCGGTTCAGGCAGTTCCAGAT
GTGACATTTAAGGATGTAGAAATTTCAACAAATTTTACACCAGAGAAAGTGAATCAAATG
ACATCTGTTGATGAAGTGATAAGCAAATTAGGTAGTGAATGTAAGGATATCAAAGATACT
TACGATAGTCTTGAAATACCAAATGTAAGCTTAATAAATAGTAAAACTGACTCGTCCAAA
GACCTAGACATTGAAAAAAAAATTAATAATATACCGAACAGTTATGTAAAAGAAGAAAAA
GAACATGATACTGATATTGTTAGAACGCCTAATATTGATAATGCTTCTTCGAATGTTAGC
GATAAAGATAAAGACACTGTATACCATAAAAGTACATCATACATTATTGGTCGAGCTACC
TTAACTTATACAACAAGACAGAAAATAAATTTTCACCTAGTAGAAAATAACGAAGTTTTG
CACTCTAGGATCTCACCACGTTCATTAAATTATCCTTTGAACGTTGTTTCCGTACTGAAA
AAGGAAATATCGAATCAGAAATACAATAACGATGACAAACTAAACTACAATAGCCAAGAT
AGTAAATCTGACGATGAAACAGAAACTCGTCTTACTCCTATTAACCGTTCTTATGCTCTC
AAGAGTGAAAAATTAGTAAAACCATCAGATATAATTAGTACAATAAAACTTAATAACAAT
TTGTTACATAGAGACCTCTGTGGACAGTTTCAACGAGAACTTAATTTCATTGATTCATTT
TTCGAGTCTCTTCAGTATTTAGATAGCTGTTCCTTATCTGATAGAAGTATAACAGAAAAA
AAGGTTGAAAACTGGATTAGCGGCGGTGCCAATGAAGTGAAGAACTTTGAATTTGGATCA
TTTTTGTCACAATTCGAAAATGAATTTAATATTGACAACCCTAAAACAATGGCGTCCGAG
AGTCTTTGTCTGCTCAATTTCCTCATTCAAAATGAGCAAATTAAAGCAGAATATCTATTG
GATGCTTTGAAAATGCGTGAAGACGCTTTGAAACATTTTACGAAGTCGCAAATTTTGTGG
TTGGAAGATAAGAAAAAACATGATCACACCGACATACCGACACTGAAAAAGAAACAAAGA
GGTGCAATCATAAAACTTCAACACGAATGTGGTGAAATGCAGCGCATGCGAAAGGCTCTG
TTGGCGTTGTCGGAACAACGTAAACTGGCATTGAAGAAAACAAAGAAGAACATAGAACTT
AAATTAAGGAATAGCTCTGATGTGGAACAAATTATATTGGGAAAAAAGAAATTAAGACGT
AATGTTTCTACAGATCGTAACAATGCACCTCTTAAATGTTTTGAATTGTCTAGCAGCGGC
TGCGATGATAGCACTACATCGAGGCCCAAGTCAAACGCATCCATTGTACTGAACGACTTA
AAGGCAGTGACGAGCGCCGAAAAGTGCGTTCAAACAGGTGAAAGCCTCCCCCTTACATCA
GACCAATCAACGAACACCTTCGACGAGAATTTTGTAGTTGTTGATGGTAGCTACTTGAAC
ATCGTTTTCCAAAATCTATCACCTCAGATCTTCAGCGCCGGTAAACAGTACGAAGTGAAC
AAGGACGCCCTGAAGAATATAGTCGATAAAAGTAATATGCACAATATTAATCAAAATAAC
GAAGTAGCGCTTGAAGAGTTTATGGATCATATAAAGAATCACGAGTTGGAATCGAGTTCA
CCGTCCACTGCGAGAAGTTTAGTGGATGAATTCGACCAGATTTACAAGACCTATTCCGAT
GATGATATCTCATACGAAGTCGGCCGTGCTCTTGTGGACGACATCAAAGAGGTTCAAGTT
TCACCTGAAGCTGGAAACATCAAAAATGATGTTAAGACATTGGCTGTTCCGAGTGGGGGA
GTTGATCGTTCAGTGTCCGTTGACGAATGCTGTAGTTGTGAGCCATTAGTAGCTAGTGTT
GGGATTCAGGTGTCCAAAGGCAAGGAAGTGGCTCAAACTAGTGTGACGGGACCATTACCT
ATACCAGCTGGTGCTGCTTCCACTGATGATGTATCATCTGAAGTAGCCACTTGGTTGACG
CAGAGATCATCGGTGAAGTCCACCGGTGCGAGCAGTTCGAGTAGTCAATCTCATAATCCT
AGCATTTCGTCATTATCATCACCAGTTCAGTACGAGGCTGAAGAATTACGTCGTCAACAA
CTAGCCATTGAACGAGAGATTAAAGCATTAGAACAACAACAGTGTCAATTGTTGGCGTTG
CGTGAGATACCGGACAAACCCCCACCACCGTACACGCCACCAACAGAACCACGACCGTTA
AAATCTCTAAACAAGTTCATAGCTGATGACATCAATGAACAGAAAATACACAAGTTGCTT
TTCCAACCTGGCAAGCAACTCGGCGAAACAGATGTATTTGAAGTATTTGTCAAAGACTTC
TGCCAAGAGTCCATTGAAAGACAGAAGTTGGATAGAAGCGACAAATATTGGGACACATGC
AATATGATACCGGTTAAACCCAAGCCGGACAAAGAGAAATTAGTAAAGAAAGCTGCTGCT
GACCTAAAAGAAGTCTTGTCGGATGTACCACCTACCGTTGTTTCAGGTGTAGGAGCGAGG
AGGTCAGACCACATAGATGATATATTGTTTGCCGAGTGGCGACGTTGTGAACCAGAGTGG
ACTTCGTTGCACGCAGACGAAGTGATTGTTAAAAATCAGGTGTTTGAAAGCATTTTTCAG
AAGATACTATCAGAAACTGTCGACGAATATAAAAGAACTGTGCTCAGTAAACCAAGTGAT
GGATCTGTGCCATGA
Protein sequence:
MDASASNKTNPENNLYDLYLKIENPIYSARVPYNKPVVKYTRLPDFDLNTKESTKSAKSI
KSAGSSPKFSLSKKLLNPKENEKECTPKKNKLKEYINIKAPPKTVLDKTKRTKSPPNFNR
NKMSLIKDIKDKVRPVSVIHVPLDDHFRKRDIGTEASEVIMNQAVHSINNVTTAVQAVPD
VTFKDVEISTNFTPEKVNQMTSVDEVISKLGSECKDIKDTYDSLEIPNVSLINSKTDSSK
DLDIEKKINNIPNSYVKEEKEHDTDIVRTPNIDNASSNVSDKDKDTVYHKSTSYIIGRAT
LTYTTRQKINFHLVENNEVLHSRISPRSLNYPLNVVSVLKKEISNQKYNNDDKLNYNSQD
SKSDDETETRLTPINRSYALKSEKLVKPSDIISTIKLNNNLLHRDLCGQFQRELNFIDSF
FESLQYLDSCSLSDRSITEKKVENWISGGANEVKNFEFGSFLSQFENEFNIDNPKTMASE
SLCLLNFLIQNEQIKAEYLLDALKMREDALKHFTKSQILWLEDKKKHDHTDIPTLKKKQR
GAIIKLQHECGEMQRMRKALLALSEQRKLALKKTKKNIELKLRNSSDVEQIILGKKKLRR
NVSTDRNNAPLKCFELSSSGCDDSTTSRPKSNASIVLNDLKAVTSAEKCVQTGESLPLTS
DQSTNTFDENFVVVDGSYLNIVFQNLSPQIFSAGKQYEVNKDALKNIVDKSNMHNINQNN
EVALEEFMDHIKNHELESSSPSTARSLVDEFDQIYKTYSDDDISYEVGRALVDDIKEVQV
SPEAGNIKNDVKTLAVPSGGVDRSVSVDECCSCEPLVASVGIQVSKGKEVAQTSVTGPLP
IPAGAASTDDVSSEVATWLTQRSSVKSTGASSSSSQSHNPSISSLSSPVQYEAEELRRQQ
LAIEREIKALEQQQCQLLALREIPDKPPPPYTPPTEPRPLKSLNKFIADDINEQKIHKLL
FQPGKQLGETDVFEVFVKDFCQESIERQKLDRSDKYWDTCNMIPVKPKPDKEKLVKKAAA
DLKEVLSDVPPTVVSGVGARRSDHIDDILFAEWRRCEPEWTSLHADEVIVKNQVFESIFQ
KILSETVDEYKRTVLSKPSDGSVP