DPGLEAN18597 in OGS1.0

New model in OGS2.0DPOGS203926 
Genomic Positionscaffold2:- 374872-380795
See gene structure
CDS Length1044
Paired RNAseq reads  648
Single RNAseq reads  1647
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA002030 (1e-55)
Best Drosophila hit  GTPase-activating protein 69C (2e-49)
Best Human hitADP-ribosylation factor GTPase-activating protein 1 isoform a (9e-64)
Best NR hit (blastp)  PREDICTED: ADP-ribosylation factor GTPase-activating protein 1-like, partial [Pongo abelii] (1e-68)
Best NR hit (blastx)  PREDICTED: ADP-ribosylation factor GTPase-activating protein 1-like, partial [Pongo abelii] (1e-63)
GeneOntology terms










  
GO:0015031 protein transport
GO:0000139 Golgi membrane
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER
GO:0048205 COPI coating of Golgi vesicle
GO:0046872 metal ion binding
GO:0005737 cytoplasm
GO:0008060 ARF GTPase activator activity
GO:0005794 Golgi apparatus
GO:0032312 regulation of ARF GTPase activity
GO:0016192 vesicle-mediated transport
GO:0016044 cellular membrane organization
GO:0008270 zinc ion binding
InterPro families  IPR001164 Arf GTPase activating protein
Orthology groupMCL14077

Nucleotide sequence:

ATGGCATCACCGCGTACCCGACGTAAATTAAACTTTGTCCGCACTCAAGAAGAGAACCAC
AAATGTTTTGAATGCGGTACTCTTAATCCGCAATGGGTCTCAGTCACATATGGAATTTGG
ATTTGTCTGGAGTGTTCAGGTGTTCATAGAAGCCTTGGGGTTCATCTTTCTTTTGTTAGA
TCAGTTACAATGGACAAATGGAAGGATATTGAGCTGGAGAAAATGATGGTGGGGGGAAAC
CTTAAAGCTCGTACATTTTTTGAAAGTCAACCTGATTATAAACCAGATATGAAAATACAG
CAAAAATATAACACTAAGGCTGCAGCCATGTACAGGCAAAAGATAGCAGCTCTCGCTGAG
GGTCGTGATTGGAGTCCATCAGATTACAAACCGGATGTAGTCGAGAGACCGTCGGATTGG
AGCCAATCACAGTCGTTCTACTCCTCTGGTGATAACACATTCCACACCAGCGGTTCAGAT
AACAACATCAGTTACCATAGCGAGTACGGTAGCGGACGCTATACAGGATTCGGGAATACT
CCGAAGCAGTCCCAGTCAACTCCTATGTCTCCCATCCACAGCGGGCATGAGATCGTTGAC
AATACACTATCTTCATTAGCCTCTGGCTGGTCAATATTCGCGTCATCCCTTTCTAAGGCT
GCTCGTACGGCCACCGAGAGTGCGGTCAAGTATGGAGGGATCGCCTCGCAGAAGGTCTCC
GAAATGGCTTCCACCGTCACTGAGAAGGTTAACAATCGCGGCGGCTGGAGTAGTCTCAGT
GGTGCCAATGAGATGCGTCGTTCAAGCAACTCTAGTGCCCACTTCCAGTCACCTAGCTAT
GGAGCCATGAAGAACTCAACATCTGAGCCGTACTCTCAATGGAATGAGCAGGTCCAGCCA
GGCATTCAGTCGGTGGCTGCTCGTAATAACTTGGACTCCCGAGATCTCTCCCAGGTCGGA
GTATCAAGCCCTCCTCCAGACATAAAGAATATCAACATCAAGAAACGGTCAAGCGACGAC
TCCTGGGACTGGCTGAACAACTAG

Protein sequence:

MASPRTRRKLNFVRTQEENHKCFECGTLNPQWVSVTYGIWICLECSGVHRSLGVHLSFVR
SVTMDKWKDIELEKMMVGGNLKARTFFESQPDYKPDMKIQQKYNTKAAAMYRQKIAALAE
GRDWSPSDYKPDVVERPSDWSQSQSFYSSGDNTFHTSGSDNNISYHSEYGSGRYTGFGNT
PKQSQSTPMSPIHSGHEIVDNTLSSLASGWSIFASSLSKAARTATESAVKYGGIASQKVS
EMASTVTEKVNNRGGWSSLSGANEMRRSSNSSAHFQSPSYGAMKNSTSEPYSQWNEQVQP
GIQSVAARNNLDSRDLSQVGVSSPPPDIKNINIKKRSSDDSWDWLNN