New model in OGS2.0 | DPOGS203926  |
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Genomic Position | scaffold2:- 374872-380795 |
See gene structure | |
CDS Length | 1044 |
Paired RNAseq reads   | 648 |
Single RNAseq reads   | 1647 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002030 (1e-55) |
Best Drosophila hit   | GTPase-activating protein 69C (2e-49) |
Best Human hit | ADP-ribosylation factor GTPase-activating protein 1 isoform a (9e-64) |
Best NR hit (blastp)   | PREDICTED: ADP-ribosylation factor GTPase-activating protein 1-like, partial [Pongo abelii] (1e-68) |
Best NR hit (blastx)   | PREDICTED: ADP-ribosylation factor GTPase-activating protein 1-like, partial [Pongo abelii] (1e-63) |
GeneOntology terms    | GO:0015031 protein transport GO:0000139 Golgi membrane GO:0006890 retrograde vesicle-mediated transport, Golgi to ER GO:0048205 COPI coating of Golgi vesicle GO:0046872 metal ion binding GO:0005737 cytoplasm GO:0008060 ARF GTPase activator activity GO:0005794 Golgi apparatus GO:0032312 regulation of ARF GTPase activity GO:0016192 vesicle-mediated transport GO:0016044 cellular membrane organization GO:0008270 zinc ion binding |
InterPro families   | IPR001164 Arf GTPase activating protein |
Orthology group | MCL14077 |
Nucleotide sequence:
ATGGCATCACCGCGTACCCGACGTAAATTAAACTTTGTCCGCACTCAAGAAGAGAACCAC
AAATGTTTTGAATGCGGTACTCTTAATCCGCAATGGGTCTCAGTCACATATGGAATTTGG
ATTTGTCTGGAGTGTTCAGGTGTTCATAGAAGCCTTGGGGTTCATCTTTCTTTTGTTAGA
TCAGTTACAATGGACAAATGGAAGGATATTGAGCTGGAGAAAATGATGGTGGGGGGAAAC
CTTAAAGCTCGTACATTTTTTGAAAGTCAACCTGATTATAAACCAGATATGAAAATACAG
CAAAAATATAACACTAAGGCTGCAGCCATGTACAGGCAAAAGATAGCAGCTCTCGCTGAG
GGTCGTGATTGGAGTCCATCAGATTACAAACCGGATGTAGTCGAGAGACCGTCGGATTGG
AGCCAATCACAGTCGTTCTACTCCTCTGGTGATAACACATTCCACACCAGCGGTTCAGAT
AACAACATCAGTTACCATAGCGAGTACGGTAGCGGACGCTATACAGGATTCGGGAATACT
CCGAAGCAGTCCCAGTCAACTCCTATGTCTCCCATCCACAGCGGGCATGAGATCGTTGAC
AATACACTATCTTCATTAGCCTCTGGCTGGTCAATATTCGCGTCATCCCTTTCTAAGGCT
GCTCGTACGGCCACCGAGAGTGCGGTCAAGTATGGAGGGATCGCCTCGCAGAAGGTCTCC
GAAATGGCTTCCACCGTCACTGAGAAGGTTAACAATCGCGGCGGCTGGAGTAGTCTCAGT
GGTGCCAATGAGATGCGTCGTTCAAGCAACTCTAGTGCCCACTTCCAGTCACCTAGCTAT
GGAGCCATGAAGAACTCAACATCTGAGCCGTACTCTCAATGGAATGAGCAGGTCCAGCCA
GGCATTCAGTCGGTGGCTGCTCGTAATAACTTGGACTCCCGAGATCTCTCCCAGGTCGGA
GTATCAAGCCCTCCTCCAGACATAAAGAATATCAACATCAAGAAACGGTCAAGCGACGAC
TCCTGGGACTGGCTGAACAACTAG
Protein sequence:
MASPRTRRKLNFVRTQEENHKCFECGTLNPQWVSVTYGIWICLECSGVHRSLGVHLSFVR
SVTMDKWKDIELEKMMVGGNLKARTFFESQPDYKPDMKIQQKYNTKAAAMYRQKIAALAE
GRDWSPSDYKPDVVERPSDWSQSQSFYSSGDNTFHTSGSDNNISYHSEYGSGRYTGFGNT
PKQSQSTPMSPIHSGHEIVDNTLSSLASGWSIFASSLSKAARTATESAVKYGGIASQKVS
EMASTVTEKVNNRGGWSSLSGANEMRRSSNSSAHFQSPSYGAMKNSTSEPYSQWNEQVQP
GIQSVAARNNLDSRDLSQVGVSSPPPDIKNINIKKRSSDDSWDWLNN