| Genomic Position | scaffold2:- 295944-298454 |
|---|---|
| See gene structure | |
| CDS Length | 2511 |
| Paired RNAseq reads | 70 |
| Single RNAseq reads | 612 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000088 (2e-08) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to pol-like protein [Acyrthosiphon pisum] (1e-76) |
| Best NR hit (blastx) | PREDICTED: similar to pol-like protein [Acyrthosiphon pisum] (3e-74) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10203 |
Nucleotide sequence:
ATGGATTCCATGGATGACAATGACTTAATACTTTTAAATAATGGTCAACCAACAACTATA
GGCTCTCATATTTGGAAACCGAACAGTCTAGATTTAACTATGGTATCTTCTTCTTTGTTT
CTTTCTTGTGAATGGCAAGTTCATCAAGAATCTTTAGGCAGTTATCATCTGCCCACTATC
ACAAGATTTACTCTCGTAAGAGACGAACATGAACCCTCTATTTCCTCGAACAACATTCCT
TTTCACAGCAACCTGAAATTAGTAAATTGGGATAATTATGAACAAATTGTTAATGAAATG
TTAATGAACTTTGAGATTGACAACTGTGATCTGCTCGATTCATACAGAAAGTTTTGTGCA
ATTATTCTATCGGCAATCGAATTTTCTGGACCTAGCTTAAACCATAATACAACTGATAGT
AGTAATAACCGTCCTAGAAAGAGGCGTCAAGTACCTCGGTGGAATGCCAAATGTTCAAAA
GTAGTAGAAGACTGCAAGAACGCGTACATTAATTTCAAAACTAGTCTTAATAGTCAAAAT
TACATTATTTTCAAGCGTGCACAAGCCTTCAAAAAACGTACTCTAAAAGAAGAACGTCGC
AAAAGTTGGTCTGAATTCTGCTCCTCAATAAATCGTTTGACATCAATAAGTCGCATTTGG
GCTAAAATGAGAAAATTCAAAAAAAGCTTTTCAAGTTTTAATCTATTTTCTGACCTCAAT
TGGGTTCAGACATTTTTATATAAATACACACCTGATACTGTTTCACAACAGATAAGTATA
GATAATGTTCTTGGAGTAAATAGTGATAATTCATACATGATTGGTCGTTTTACTTTACAA
GAGTTAAAGTCTGCATTAGCTTCTAGAAAAGATTCCTCATGTGGCCTGGATTGGCTTTCC
TATAGAATGTTTAAACTTTTAAATGTTCAAAATCTATCTATTTTCCTAAGTTTGTTAAAT
AGTCTATGGTCGTCTTCTATTATCCCAGAGGATTGGAAAACTGATTGTCTGGTACCAATA
TTAAAACCTGGCAAAGGCTCAAATTTGGCTGATTCTTATCGTCCCATTACGCTTAGTTCC
TGCGTTGGAAAAATTTTCGAACAATTAATAAAACAGAGACTAATTTTTCACATAGAAAGT
AATAATCTTTTACCTCACAATCAGTTCGGCTTTCGTTGTGGTCGTTCTGCTTGTGAGAGT
TTACGTCATCTCTGTCTGGATATCCACGATGCTCGTTCCGAGAATAAAGTATTAGTTGGA
GTTTTTTTAGACATTGTAGGGGCATTCAATAATGTAAATCTGGAAAAACTATCCTCAATT
TTATTATCACTACAGGTACCTGGAAAAGTTGTAAATTGGATTTTTAATTTTTTGAACTAC
AGAAAAGTGTTTGTTAAGGTTAACAATCGGTTATTTGGTCCAAGGTATTCTTGTAGGGGT
GTATCACAGGGTGGTGTATTGAGCCCTCTACTCTTTATCCTATTCATACATCAGCTAAAT
TCAATACTGGGGAGTGAAGTTTCTAATCTGCAGTTTGCAGATGATTTAGTTGTTTATTGT
TCTGATACTAGTCTGTTACATGTACAATCAGTCCTCAACGTTGCACTCCAGAAACTAAAG
AACTATTTTGATAGCCTTGGGCTAGAGGTCAGCATTGACAAAAGTAAAGTTGTTGTCTTC
TCAAAAAAGGCTATTAGAAATAGGAATGTCAATATTTTGTTCAATAATAATGTAATGTCT
GTAGATAGGTCTGTAAAGTTTTTAGGTGTTATTTTTTCAAACAATTCTAGATGGAATAAG
TATGCTGAAATCCTAGAAGCTCGTGCTTTAAATGCTTGTAATGTTTTAAAATCTTTGACA
GGCACATATTGGGGTGCTGATCCAAGGATTTTATTAACATTGTATAAATCGTTAGTAAGG
AGTCATTTTGAATATGCTTACTTTTGTTTTGCAGGAGTAGGTACTATAGTGGATAAATTA
GAAAAGATACAAAACAAATGTTTGCGTATTATAATGGGTGCGATGCGAACTACTCCCATA
GTGTCAATGCAGGTGGAATGTAATATACCTCCATTGGCACTTAGGTTTAAATACTTACAA
TCAAAATTTTTTGCAAGGTTGCTCTCCATTAGTAATCATCCACTTCTTGTTAAACTGAGG
CACACTAATAACAGGACTGCCAATATTAATTCTTATCTGTTGCAAGGTTTCTCTGAAACA
GAACAAATTTTTAATGAACACAACATTTTTTCCAGCATAGTATGGCCTTGTTACTCTGGG
TCATACAAATCTAAATTTATTCAGATTAAAATTGTAGTTAAAAAATTTTTAAAGTATAAG
GAAGACATTTATAGGGAACTTGATAGGTGGCAGGGATATCATCAGATATACACAGATGGG
TCTAGGAATAATGAAGCAGTCTCTATAGCTGTCTATGATAGTCAGGTCAAAAGTGGATTT
GGGCATAGGCTGAATCCACTCACAAGCATATACTCAGCTGAATTTAAATAG
Protein sequence:
MDSMDDNDLILLNNGQPTTIGSHIWKPNSLDLTMVSSSLFLSCEWQVHQESLGSYHLPTI
TRFTLVRDEHEPSISSNNIPFHSNLKLVNWDNYEQIVNEMLMNFEIDNCDLLDSYRKFCA
IILSAIEFSGPSLNHNTTDSSNNRPRKRRQVPRWNAKCSKVVEDCKNAYINFKTSLNSQN
YIIFKRAQAFKKRTLKEERRKSWSEFCSSINRLTSISRIWAKMRKFKKSFSSFNLFSDLN
WVQTFLYKYTPDTVSQQISIDNVLGVNSDNSYMIGRFTLQELKSALASRKDSSCGLDWLS
YRMFKLLNVQNLSIFLSLLNSLWSSSIIPEDWKTDCLVPILKPGKGSNLADSYRPITLSS
CVGKIFEQLIKQRLIFHIESNNLLPHNQFGFRCGRSACESLRHLCLDIHDARSENKVLVG
VFLDIVGAFNNVNLEKLSSILLSLQVPGKVVNWIFNFLNYRKVFVKVNNRLFGPRYSCRG
VSQGGVLSPLLFILFIHQLNSILGSEVSNLQFADDLVVYCSDTSLLHVQSVLNVALQKLK
NYFDSLGLEVSIDKSKVVVFSKKAIRNRNVNILFNNNVMSVDRSVKFLGVIFSNNSRWNK
YAEILEARALNACNVLKSLTGTYWGADPRILLTLYKSLVRSHFEYAYFCFAGVGTIVDKL
EKIQNKCLRIIMGAMRTTPIVSMQVECNIPPLALRFKYLQSKFFARLLSISNHPLLVKLR
HTNNRTANINSYLLQGFSETEQIFNEHNIFSSIVWPCYSGSYKSKFIQIKIVVKKFLKYK
EDIYRELDRWQGYHQIYTDGSRNNEAVSIAVYDSQVKSGFGHRLNPLTSIYSAEFK