New model in OGS2.0 | DPOGS203968  |
---|---|
Genomic Position | scaffold2:+ 491464-497606 |
See gene structure | |
CDS Length | 2580 |
Paired RNAseq reads   | 954 |
Single RNAseq reads   | 2290 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003897 (0.0) |
Best Drosophila hit   | toutatis, isoform A (1e-08) |
Best Human hit | E3 ubiquitin-protein ligase UHRF1 isoform 1 (8e-129) |
Best NR hit (blastp)   | PREDICTED: similar to NP95 [Acyrthosiphon pisum] (2e-173) |
Best NR hit (blastx)   | PREDICTED: similar to NP95 [Acyrthosiphon pisum] (1e-168) |
GeneOntology terms    | GO:0002088 lens development in camera-type eye GO:0031100 organ regeneration GO:0005515 protein binding GO:0008270 zinc ion binding GO:0010216 maintenance of DNA methylation GO:0046872 metal ion binding |
InterPro families    | IPR000626 Ubiquitin IPR001965 Zinc finger, PHD-type IPR001841 Zinc finger, RING-type IPR003105 SRA-YDG IPR019787 Zinc finger, PHD-finger IPR019955 Ubiquitin supergroup IPR011011 Zinc finger, FYVE/PHD-type IPR021991 Domain of unknown function DUF3590 IPR018957 Zinc finger, C3HC4 RING-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR017907 Zinc finger, RING-type, conserved site |
Orthology group | MCL15963 |
Nucleotide sequence:
ATGCACGTTCGTGTGCGCATGTTTGGTAAACCTGATACTATTGTTGTAGTAGAATCAAAA
CTTACGAAGTTGCAACAGTTTCGACGTATTATAAAAGAAAAATTTGATGTCGAACCAAAG
TTACAACGGTTATTTTACGGCGGAAAACTGCTAGAAGATGGTTACACATTCCATGACTAT
AACATTAAACTGAATGATGTAATCCAGCTCATTGCTGTACCCCAGACTGTTGAAAGTGAA
GATGAAAAGAAATCACTTGACAACCAAGAGCAAGTAAAAGAATCCGACTTTGAGGAGAAA
ACAATAGTTTATACGGATGTTACAAGTACAGTCTATGCAGTTGGGGATTTAGTTGATGTC
AAAGACAGAGAACAGGGTGCCTGGTTAGAAGGTAAAATAGTTAGGATAGTCCTAGATCCT
AAAGTAAATTATGAAAATGAACAAAACAAGGAAGATTTAAATAGTAGTTTGGATAATAAA
AATGATCTTGAAAACAAACCACCAAGTAATATCTCTGAACAGTCAAACACACAAAAGATT
GGTATTGCTAAATATTTTACAAAACAGACAAATGGAAAGAGATTGTCTAAGGATTTTAAG
GTAAAAACAGTAAAAGTTACAGCAGAGAATGTTCTGTATAAGGTGCAATTAGATGATGAT
GAAGAAGATTCTGAGTTGTTTTGTAAGCTCAAAGAAATAAGACCCAGAGCTCGGCACGAG
ATTGATGTCAAGGATTTAATGCCTGGACAAAAGGTCATGATAAATCACAACACTGATGAA
CCATTGGAAAAAGGATATTGGTATGATTTCAAAGTAGATGAAATAAAAAAATTGAGGACA
AGCTATGAGATTGTTGGAACTTTGTACCTCGGTCCAGACTCAGTTCCACAAAATGACACT
AAAGTTAAAATCCATGATAAAATATTTACTATTGAGGAACCAGTGCCCTTGGAAAAGAGA
ACTGAAGATTATCTTAAGTCAATACAAGAGACACCGGCAGCCAGATCTAAACCGCTGAAT
TGCTTAAAATGTAGAGACAATGAAGAAGAACCCTGCAAGGAATGTGGATGTTATTTATGT
GCCCAAAAAAATGATCCAGATAAGATAATTCTGTGTGATGAATGCCACAATGGTTACCAC
ATGGTATGTCTGAAGCCACCACTGACCGTGCTACCTGATGATGACTGGTATTGTCCATCA
TGTAAGCGGGATCCAAACGATGTCATAGCACCCGGTGCATCCAAACAAGCAAAAAAATCC
AATACTTCTAAGACTAACAGAGATTGGGGCAGAGGCATGGCATGTGTTGGAAAAACAAAA
ACTTGTCCAATGCCCCTAAACCATTTTGGTCCTATACCTGGAATAGAAGTTGGAATGTGT
TGGAGATTTAGGATACAGCTTTCTGAATCAGGAGTGCACAGACCACCAGTTTCCGGAATA
CATGGCCGGGACATTGAAGGAGCCTACAGTATAGTGCTGTCAGGTGGATATGAAGATGAT
GTCGACAACGGCTATGAGTTCACTTATACTGGTAGCGGTGGAAGAAATCTGTCGGGAAAC
AAGCGAACCGCTGAACAATCATGTGATCAAACTCTTACTAGGGAGAACAAAGCGCTGGCT
CGCAACTGTGCCGTTGATAAGGTGAGTGAGGACGGTGGGGACGCTGGGGATGATTGGCGC
AGAGGAAAACCAGTGAGGGTAGTCAGATCCTGCAAAATGATGAAACACTTTCCGAAATAT
GCACCTCAGGAAGGAATACGATACGATGGTATCTACAAGGTGGTGAAATATTATCCCGAA
AGAGGTCTATCCGGGTATATTGTGTGGAAGTACCTTCTGCGGAGAGATGACCCTAGTCCA
GCACCATGGGAAACGGGGGCAAAAAAATATAATATCGTGTACCCAGATGGCTATTTAGAA
GCGGAAGCGGAAAAGAAAGCCTTGAAAGAAAAAGCAACGAATAGTAAAAAATCTTCAAAA
AGAGTAAAACGTAACGAAAGTTCTTCATCAGAAACAGATTCGTCTCCAGTAGTAAAAAAA
CGGAAAGTACAAAAAACACCTCAGAATGGTAAAGTCCGTAAAAAACAAAGCTTGTCAGAC
AGCAGTGAGTCCTCATCTGAAATTGAAAAATCTACAAGCAAAGACACGAACCCGAAAAAA
GAGAATAGAAAATCTGTAATACCGAGCATATTTACGAAAAGTCCAAAGAACAAAAAAGTA
AAAGCGGAAGAACCGCTTAGTGGAGAGGAAAAAGAGAGTGTGATGGCTGACACCCTCAAT
TCAAAATTATGGGGCGACTGTTTAGATGTCTGTGAGAAGCAAGGAAAGAAGGAATTCATA
GAGCATGTGACTCAAGTGTTCCTTTGCATCATCTGTCAGGATGTGGCTGTAAACCCGGTC
ACTACACCATGCTCTCATAACTTTTGTATTGGCTGTCTGAAGCTAGCGTTCAAGTCTTCG
GATTCCCAGGGCTGCCCATGTTGTAGACAAAGTCTCGCTAAAATGGAAGTACAAGTGAAC
GAACAACTAAAGAAAGCCTTGCAAACCATACTAAAAGGATATGATGCCGGCAAGAAATAA
Protein sequence:
MHVRVRMFGKPDTIVVVESKLTKLQQFRRIIKEKFDVEPKLQRLFYGGKLLEDGYTFHDY
NIKLNDVIQLIAVPQTVESEDEKKSLDNQEQVKESDFEEKTIVYTDVTSTVYAVGDLVDV
KDREQGAWLEGKIVRIVLDPKVNYENEQNKEDLNSSLDNKNDLENKPPSNISEQSNTQKI
GIAKYFTKQTNGKRLSKDFKVKTVKVTAENVLYKVQLDDDEEDSELFCKLKEIRPRARHE
IDVKDLMPGQKVMINHNTDEPLEKGYWYDFKVDEIKKLRTSYEIVGTLYLGPDSVPQNDT
KVKIHDKIFTIEEPVPLEKRTEDYLKSIQETPAARSKPLNCLKCRDNEEEPCKECGCYLC
AQKNDPDKIILCDECHNGYHMVCLKPPLTVLPDDDWYCPSCKRDPNDVIAPGASKQAKKS
NTSKTNRDWGRGMACVGKTKTCPMPLNHFGPIPGIEVGMCWRFRIQLSESGVHRPPVSGI
HGRDIEGAYSIVLSGGYEDDVDNGYEFTYTGSGGRNLSGNKRTAEQSCDQTLTRENKALA
RNCAVDKVSEDGGDAGDDWRRGKPVRVVRSCKMMKHFPKYAPQEGIRYDGIYKVVKYYPE
RGLSGYIVWKYLLRRDDPSPAPWETGAKKYNIVYPDGYLEAEAEKKALKEKATNSKKSSK
RVKRNESSSSETDSSPVVKKRKVQKTPQNGKVRKKQSLSDSSESSSEIEKSTSKDTNPKK
ENRKSVIPSIFTKSPKNKKVKAEEPLSGEEKESVMADTLNSKLWGDCLDVCEKQGKKEFI
EHVTQVFLCIICQDVAVNPVTTPCSHNFCIGCLKLAFKSSDSQGCPCCRQSLAKMEVQVN
EQLKKALQTILKGYDAGKK