New model in OGS2.0 | DPOGS203980  |
---|---|
Genomic Position | scaffold2:+ 927845-932913 |
See gene structure | |
CDS Length | 1890 |
Paired RNAseq reads   | 16 |
Single RNAseq reads   | 49 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002119 (0.0) |
Best Drosophila hit   | sidestep, isoform B (3e-31) |
Best Human hit | nephrin precursor (2e-09) |
Best NR hit (blastp)   | PREDICTED: similar to CG12950-PA [Apis mellifera] (8e-36) |
Best NR hit (blastx)   | PREDICTED: similar to CG12950-PA [Apis mellifera] (4e-35) |
GeneOntology terms   | GO:0008045 motor axon guidance |
InterPro families    | IPR003599 Immunoglobulin subtype IPR007110 Immunoglobulin-like IPR013162 CD80-like, immunoglobulin C2-set IPR013783 Immunoglobulin-like fold |
Orthology group | MCL39640 |
Nucleotide sequence:
ATGTTAAAAGAGGTTGTTGTCCTTCGAGCCGTTCGTGGTAGAGATGCGCGGCTTCCTTGT
GGCCAAGGAAAGGTGTTTTTAGATGGACCAGACTCATATGTGCTGTGGCTTAAAAATGAC
AGAGATTTCCTATACAGATTTCCCAACGAAGAAACTGAACGGAGAGTCGTCAACAGGGAT
AGGATATTTGGAACTTCATGTGAAGAAGGCACATGTTATGATGATACCTCTCTTATACTA
AAGCGAGTAAGTGAACAAGACGGTGGCATTTATCGATGTAGAGTACATTACCAAGCATCT
CCATCTCTGGACTATGTAATCGACGTTAGGTTAGTCGATTCTCCAGGCATCCCTAGAATT
TTTAATGAAGGAGGTGAAGAAATAAAAAGAGGCTACGTAGGTCCACTCAGTTTGGGTTCG
AATATGTCTTTGATTTGCGAAGTTGATGATGATCAACCCGATACACTTGTGTACTGGCGT
CGTAACGGTATACTGATCGAGCGGGCGCACACAGTTCGAACAGGCGTGTTGCGTGCTGCC
GTTCGTGTGCGCAACGCAACGCGAGACGAACTCGATGCACACTATGAATGTTTGGCACAA
AATGCCGATGTCACCGAACCATTGAGTGCCAGCGTCGTGGTTAAGATGTACCTTCCGCCA
CTTAGCGTTGAAATACGTCTCAACAACAATTTTGACTTCGAAGCCGGTCATCCAAGAGTC
GTAGACTGCGTGATTGTTGGTTGCGTACCACCACCCGCAATTACGTGGCACCTCGGGGAA
CAATTACTTCGGCCTAATGTGCATAAAGAACTTCATGATGGCAACTATACGGTGTCTTCT
CTGACGTTGTCGCCTTCTTTGCGCGACTCCAAGCATGATTTAGTTTGTCGAGCTCACAAT
TCACATTTACCAACCTCGGTGTTCGAAGATAAAGTTACTTTAAACGTTGGATATCGTCCT
TTGTGTCTAAATAATCGAGAAGAGACCGTTGGAGCGCTGGTTCAGGACGCAGAGACAGTT
AGCTGTGTAGTGGAAGCGTCGCCTGAGCCGCTACAGTTTAGCTGGACCTTCGCTGACTCC
CGAGTATTATACACCAGTGTGAAGAAGGTATCAGGGCATCACAATAGGTATTCATCAACA
CTAACATGGCTTCCAAGAGAAACAGATATCGGCCTTCTTCTATGTCGAGCAACAAATTCA
TTTGGAGAACAAAAACGACCATGCTCGTACAGCATAGTACCTGGTGGTCCACCGCACGCC
CCTGAGTGTGTCGTATTGAGATCTTACCCCCATTCCGTACGAGTACAATGTCAGAAAGGT
TGGGATGGCGGCAGACAACAAACCATCCATTTGGAACTCCTAGGCATGGACGGTACGGTC
TTCCACAATATATCTAATGCAGCTGGGCATTTCCTTTTACCTGATATTGAAGACGACAGA
AACTTGACCGCACTTGTGTATGCAAGCAGTCCAAGAGGAAGAAGCAAAACAAGAACTGTT
CATTTACAAACAATAACTCCTCTTAGTCCTTCAGCTGTGGCAGAAACAGTTCCTCTTTAT
TCCTGGACGCGGTGGATGGAAGTGACCGCAGGGGCGGTAGCCGTCACCGCAGCCATTGGA
GCAGCTATTATTTGTATCAAACTTATGAAGACCAAACGAGAGAACATGGAAATGAATCCG
GATTTAGTTTCTAGAACTGATGGTTCATTCCATCGAGAGCCAGACTTTGCACGTGAAGAG
CGGGTACTGGGGACAACTAATATAACCGTTAACCAGTTAGCTTCTTGTCAGAACCAATAT
TCCGCTTCACCAGTGCCAGCTTGCCGCGTGCTGGTTGGATGCGCGGCTCAAGACTCTTGT
CCAGCATCACAGCATTCTTACTATGTCTAA
Protein sequence:
MLKEVVVLRAVRGRDARLPCGQGKVFLDGPDSYVLWLKNDRDFLYRFPNEETERRVVNRD
RIFGTSCEEGTCYDDTSLILKRVSEQDGGIYRCRVHYQASPSLDYVIDVRLVDSPGIPRI
FNEGGEEIKRGYVGPLSLGSNMSLICEVDDDQPDTLVYWRRNGILIERAHTVRTGVLRAA
VRVRNATRDELDAHYECLAQNADVTEPLSASVVVKMYLPPLSVEIRLNNNFDFEAGHPRV
VDCVIVGCVPPPAITWHLGEQLLRPNVHKELHDGNYTVSSLTLSPSLRDSKHDLVCRAHN
SHLPTSVFEDKVTLNVGYRPLCLNNREETVGALVQDAETVSCVVEASPEPLQFSWTFADS
RVLYTSVKKVSGHHNRYSSTLTWLPRETDIGLLLCRATNSFGEQKRPCSYSIVPGGPPHA
PECVVLRSYPHSVRVQCQKGWDGGRQQTIHLELLGMDGTVFHNISNAAGHFLLPDIEDDR
NLTALVYASSPRGRSKTRTVHLQTITPLSPSAVAETVPLYSWTRWMEVTAGAVAVTAAIG
AAIICIKLMKTKRENMEMNPDLVSRTDGSFHREPDFAREERVLGTTNITVNQLASCQNQY
SASPVPACRVLVGCAAQDSCPASQHSYYV