| New model in OGS2.0 | DPOGS203985 |
|---|---|
| Genomic Position | scaffold2:+ 1063387-1073712 |
| See gene structure | |
| CDS Length | 1080 |
| Paired RNAseq reads | 58 |
| Single RNAseq reads | 165 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002127 (5e-52) |
| Best Drosophila hit | apterous, isoform A (3e-72) |
| Best Human hit | LIM/homeobox protein Lhx2 (4e-83) |
| Best NR hit (blastp) | apterous [Tribolium castaneum] (1e-113) |
| Best NR hit (blastx) | apterous [Tribolium castaneum] (4e-108) |
| GeneOntology terms | GO:0007420 brain development GO:0021537 telencephalon development GO:0031290 retinal ganglion cell axon guidance GO:0043565 sequence-specific DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0030528 transcription regulator activity GO:0045449 regulation of transcription GO:0005634 nucleus GO:0008270 zinc ion binding GO:0003677 DNA binding GO:0043010 camera-type eye development GO:0007411 axon guidance GO:0030900 forebrain development GO:0007634 optokinetic behavior GO:0046872 metal ion binding |
| InterPro families | IPR001781 Zinc finger, LIM-type IPR001356 Homeobox IPR009057 Homeodomain-like IPR012287 Homeodomain-related IPR017970 Homeobox, conserved site |
| Orthology group | MCL10320 |
Nucleotide sequence:
ATGCTTAAGGAAAGAGAAAGCTCCGAGGGGTCGCCTGCTACCCCGGACGAGTGCGCGGGT
TGTGGGGGCAGAATACAGGACAGATATTACCTACTTGCTGTGGACCGTCAATGGCACGGT
GCTTGTCTGCGCTGCTGCGAGTGCCGACTGCCGCTAGACAGCGAACTAACATGCTTCTCC
AGAGACGGAAACATTTATTGCAAAGACGATTATTACAGATTATTCTGCGTGAAGCGATGC
GCGAGATGCGGTAACGGGATTACCGCTAACGAGCTGGTAATGAGAGCCCGAGACATGGTG
TTTCACCTGACTTGCTTCACATGTGTCGCCTGCGGGACCCTGTTGTCTAAGGGAGATGTG
TTCGGGATGAGGAACAGCCTGGTGTACTGCAGACCGCACTACGATAGCGTCTGCATGGAT
GACTTCTGTGAGGAAGACGTCAATAGTGTTTACAGGTGTCAAGAATTGAACAGCGAAGGT
GACTCTCCGAATCAGTACTTTCCCGTAGGCGTTAACCAGAAGGGTCGGCCGAGAAAGAGG
AAGATAGCCCACGGTCCTCATGAAGACATGCAAGTACAGACCATGAGAATGGCCAGCACG
GCGTTAGACATCCTTCACCGGGCTGACCTATCATCGTCAATGGAGTCCTTGGCTTACGAT
TCTTCGGTTGCATCACCGGGAAGTGTTTCAAGTCATACACAGCGAACTAAGCGCATGCGC
ACCAGCTTTAAACATCACCAACTTCGCACGATGAAATCGTATTTCGCCATTAACCAGAAC
CCAGATGCAAAGGATCTTAAGCAATTGGCTCAGAAGACTGGCTTATCTAAGAGAGTTTTA
CAGGTTTGGTTTCAAAATGCTCGAGCGAAATGGCGTAGAAATATGATGAGACAGGAATCG
AATCAGCTTGGACTGATGACTCCTAATGGAAGCACTGGACACTCTGTAAATGGTGGTCTT
GTCACAGGAGTTCCTCCACCAAATGTAGATCCTGGAATGATAATGTCTGAACCATTGCAA
CCCATACAAGACATTAGGGTTCACACTCCTCATCCAATGAGCTTCGGAGAAATGTACTGA
Protein sequence:
MLKERESSEGSPATPDECAGCGGRIQDRYYLLAVDRQWHGACLRCCECRLPLDSELTCFS
RDGNIYCKDDYYRLFCVKRCARCGNGITANELVMRARDMVFHLTCFTCVACGTLLSKGDV
FGMRNSLVYCRPHYDSVCMDDFCEEDVNSVYRCQELNSEGDSPNQYFPVGVNQKGRPRKR
KIAHGPHEDMQVQTMRMASTALDILHRADLSSSMESLAYDSSVASPGSVSSHTQRTKRMR
TSFKHHQLRTMKSYFAINQNPDAKDLKQLAQKTGLSKRVLQVWFQNARAKWRRNMMRQES
NQLGLMTPNGSTGHSVNGGLVTGVPPPNVDPGMIMSEPLQPIQDIRVHTPHPMSFGEMY