| New model in OGS2.0 | DPOGS203996 |
|---|---|
| Genomic Position | scaffold2:+ 1301169-1312893 |
| See gene structure | |
| CDS Length | 3330 |
| Paired RNAseq reads | 1425 |
| Single RNAseq reads | 3219 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002141 (0.0) |
| Best Drosophila hit | RhoGAP15B, isoform B (1e-103) |
| Best Human hit | arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 (6e-39) |
| Best NR hit (blastp) | PREDICTED: similar to RhoGAP15B CG4937-PB [Tribolium castaneum] (1e-165) |
| Best NR hit (blastx) | PREDICTED: similar to RhoGAP15B CG4937-PB [Tribolium castaneum] (4e-161) |
| GeneOntology terms | GO:0005083 small GTPase regulator activity GO:0007165 signal transduction GO:0005622 intracellular |
| InterPro families | IPR001849 Pleckstrin homology domain IPR000198 Rho GTPase-activating protein domain IPR008936 Rho GTPase activation protein IPR011993 Pleckstrin homology-type |
| Orthology group | MCL10927 |
Nucleotide sequence:
ATGGATACACCACCCGTTCCAAAACCACGGGTTACACATTTACCACAAAATGAAGTAAAG
CGGCCGATTCCACTCCCTCGAACTAAACCCCCCGTGAACAATGAACGAGTCACGGCGACA
GATATATTTCGTTCTATTAGTTCTGTCTCGAAACAAATAACTGAAGATGTTGCTCAAAAA
GTTAGCAACTCAGCTAAGTGTGCCAATGAAAAAATTGAAAAATCCATAAGTGATGGATCG
AAATTCGCTAAAGGAACTTTAGAAAAAACTATGAGCACGTCAAGAGCAGTTAGAGATTCC
GTCACAAAGTCAGTAATAGAAGGGACTAAATCTGCGGGCTTAAAGTTACGTTTATCCAAG
AGAGTGGGAAGTCCAGAAGAAGAAGATTCTCAAAGATGTGTTTCTATGCCAGTAGTTGAT
GTGAGTTTATTTGACAATATTCAATTTCACTCTCCTCTTTTGGAACAAAAGAGATTTAAA
AACGATGATGACAGCTGTACAAAAAATCAACTACCATCTTTACAATTAAATGCAACTCAT
TTGGATGATGTTTCATTGTATTCCACTTTCTCAGATTCCAATACTGATTCCATGAGTAAT
CTTTCTTATGATGTTAAGGAAATTGAAGGTACAGAATTACCTATACATTATGATACCTAT
GATACACCGCAGTCCTCTAGAGCTAATAGTGTGATAAGCACAACTTCTGCTCCTGAAGTA
CCTGAAAGGCGACACAAAAGAAATAGTCATATTGAAATAATGAGACAAAATTCCCTATAC
GAAAATTGGACACTTCCCTTTACACTAAATAGTGAAACTAAACCAGAAACTGTTACAAGG
CCAAGTAAAAGTACAATATATGAATTTGATCCTTTAAATAATAACTCTGATAATGCAAAG
AGGTATGAAGGTGTCAGTAATGAGCTACTTCTTTTGGAATCATTCTTGATTGGTGATACT
TATGGCACAATCATTTCAACAGACAGTGGAAATGATGAACCAATTTATGACTTTGGTGAA
AGTGATTATTTCAATCCACCCACACCGCCGGAACGCTCGGACAGTCTTCTACCAAATGAG
CCTTTAGCAAAATCTTCCTCAAGCAGTTCTGAAAAAGAAAAGCTTTCTAATTGGTATGTT
GGTACAGATCCTTCTAGTACCGAAACAGTGCAGGAGGATATCAAACCATCAAGCTCTATG
ATACAAAAATTTTCAAGTATGCTAAAACTGGATAATAAGCTTAGCAAATCTAATAGTAAA
TCTTCTGTACAAAAAATTCATGTGATTGAGCGTCCTCCCTTAAACAAATATCCTGTGCCA
TATTACAGTGGAACATTGACTAAAGTAGTCTCTGGCCTTGTTGAAGATTTATTTAAAAAT
TCCCAATCTCGATATTGTGTGTTGTCTGATCAAAAACTTATTTGCTATACTGATCCTGCT
AATTTAATAATGAAAGAGGCATATACTTTAGATAATATACTTTCTCTTCAAATAGTTTTG
CCATTGTCATCCAGCACCTCAAATAACTCTTACTGTTTTGAGCTAACGGTATCTACTGGT
CTTCGTAACGCTCCTAGAAAAATCTTATTCAATTGTGGAAGTGCATCAGAGAGACGAAAT
TGGGCTCAAAAAATTGCAGAACATTTGACAAGTGGCATACCCATTAAATACTCTTCAGAA
TATACTAGATGTGGCTGGTGTTATCTCAAGGAGGGTGTGAGCGGCGCTTGGTGTGGGGCG
TGGGTGATGTTGGTGAGACGTGTGCTCGTTTACTGTTACAAAGAAGACGAAATTCATACT
GTCGATCTGAGAAAGACGAGATGCATCGCAACTCAGGAAGCGGATGAAGAAACGAAGAAT
TCATGTCCGTCAGACAACAGTCCGAATCTCTTACTAGACTGTCCGCACGTCACTTTGTAT
CTACGGTTTCCTCATGAGAGGGAACTCAAGGGTTGGAAGTACATGGTGAAACTTTCAGCT
CATAATAACGGCTCCCACATTCATCACCAACAACTAACTAAAGAGGATGTACCGGTCATA
GTGGACAAATGTCTCAGTTTCATATATGCTCATGGGAGTCTCTCGGAGGGTATATATCGC
AGGGCTGGGAGTTCCTCTGTGTTGACTGAACTTTTGTCTCGTTTCCGTCGCGATTCATGG
TCTGTCCAACTAACACCTGGAACACACTCTGAGCACGACGTGGCCGGCGTCCTTAAAAGA
TTCTTCAGAGACCTCCCACAGTCACTCGTTCCAAAGGAAAATCATGCCGAACTTATAGCT
GCCCTAGATCTGGACAAAGAGGCTCGGATGTTGGAGTATCGTCGGTTGATGACGTCACTG
CCCCTAGTGCCTCAGCGCACCGCCCGTAAGCTGTTCGCTCACCTCCACTGCCTCCACACC
ATGTCGCGTGTTAACAAGATGTGCGCCTCGAACCTTGCGTCAGTTTGGGCGCCCACTATC
ATGCCCACTGCACTGACAAGCCAGTCTTTGCAAACAGCGTGGTCTGCTAAGGAACAGTAC
GTAGTGAAGGATCTCATAACACACTACGAGGCTGTGTGGGATCCGAGTGAGAGTGAACGA
AGGAGGGAGGCTGTTATAAGGAAGATGTTATCCAAAGCTATGAACAACACAGTACCGTTA
CAACCGAAGAGTGCGGGCGACTTGCGTGCGTGGGTGTACGTTCATAACAGAGACACGTGC
TATCAGGTTGAGCTAACACCAAACAAAACAAGCGGCACTGTTTGTATAGAATTATGCGAA
AAGGCGAAAATGGATTCACATTTATTGATGGTGGAAGAGGTTATATGCAACGGTTCCATG
AGACGCGTTGTTCATATAGACGAAGTTATTTTGGACGTAGTACTGCGGTGGGGATACTGG
GACGAGGACGACAGGAAGGATAACTATCTGCTGGTTAAAGAGAACAAAATACTGCACGAA
CTAGAGTCGTTGAGGCATTCGACGTCGCTGGTCTGCGGCGAGCTACGAATAGCGAATGAA
ACTACGAAATCGTTTAAACTACATATGTTTGAGTTCAGTAATTCTAAATTGTGTTACTTT
AAAGATAAACAGGGATCTCACAAGATCGAAGAATGGAACATCAAAGACTTGCTGTGGTAC
GTTGGCCATGAACCAAAGCGGAACCCACAGTCACGGTGGGCGATCACCTTTATACCTAGG
AATAATAAACAGAAAAGAAGTAAAGACCGGCCGTGGTTCGGATGTACTATAGCAGGCGCG
GTCACCGAGGACCAGCTCAAGTGGATGACGGCAATGACCTTCGGGGAACACGCCAACATA
CTGCCAACACCACGCCTGGTCATCACATAG
Protein sequence:
MDTPPVPKPRVTHLPQNEVKRPIPLPRTKPPVNNERVTATDIFRSISSVSKQITEDVAQK
VSNSAKCANEKIEKSISDGSKFAKGTLEKTMSTSRAVRDSVTKSVIEGTKSAGLKLRLSK
RVGSPEEEDSQRCVSMPVVDVSLFDNIQFHSPLLEQKRFKNDDDSCTKNQLPSLQLNATH
LDDVSLYSTFSDSNTDSMSNLSYDVKEIEGTELPIHYDTYDTPQSSRANSVISTTSAPEV
PERRHKRNSHIEIMRQNSLYENWTLPFTLNSETKPETVTRPSKSTIYEFDPLNNNSDNAK
RYEGVSNELLLLESFLIGDTYGTIISTDSGNDEPIYDFGESDYFNPPTPPERSDSLLPNE
PLAKSSSSSSEKEKLSNWYVGTDPSSTETVQEDIKPSSSMIQKFSSMLKLDNKLSKSNSK
SSVQKIHVIERPPLNKYPVPYYSGTLTKVVSGLVEDLFKNSQSRYCVLSDQKLICYTDPA
NLIMKEAYTLDNILSLQIVLPLSSSTSNNSYCFELTVSTGLRNAPRKILFNCGSASERRN
WAQKIAEHLTSGIPIKYSSEYTRCGWCYLKEGVSGAWCGAWVMLVRRVLVYCYKEDEIHT
VDLRKTRCIATQEADEETKNSCPSDNSPNLLLDCPHVTLYLRFPHERELKGWKYMVKLSA
HNNGSHIHHQQLTKEDVPVIVDKCLSFIYAHGSLSEGIYRRAGSSSVLTELLSRFRRDSW
SVQLTPGTHSEHDVAGVLKRFFRDLPQSLVPKENHAELIAALDLDKEARMLEYRRLMTSL
PLVPQRTARKLFAHLHCLHTMSRVNKMCASNLASVWAPTIMPTALTSQSLQTAWSAKEQY
VVKDLITHYEAVWDPSESERRREAVIRKMLSKAMNNTVPLQPKSAGDLRAWVYVHNRDTC
YQVELTPNKTSGTVCIELCEKAKMDSHLLMVEEVICNGSMRRVVHIDEVILDVVLRWGYW
DEDDRKDNYLLVKENKILHELESLRHSTSLVCGELRIANETTKSFKLHMFEFSNSKLCYF
KDKQGSHKIEEWNIKDLLWYVGHEPKRNPQSRWAITFIPRNNKQKRSKDRPWFGCTIAGA
VTEDQLKWMTAMTFGEHANILPTPRLVIT