| New model in OGS2.0 | DPOGS203164 |
|---|---|
| Genomic Position | scaffold117:- 17125-17695 |
| See gene structure | |
| CDS Length | 474 |
| Paired RNAseq reads | 230 |
| Single RNAseq reads | 870 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011014 (6e-74) |
| Best Drosophila hit | bicoid interacting protein 1 (2e-50) |
| Best Human hit | histone deacetylase complex subunit SAP18 (6e-42) |
| Best NR hit (blastp) | GD20305 [Drosophila simulans] (5e-60) |
| Best NR hit (blastx) | AGAP003036-PA [Anopheles gambiae str. PEST] (2e-54) |
| GeneOntology terms | GO:0000122 negative regulation of transcription from RNA polymerase II promoter GO:0005634 nucleus GO:0003714 transcription corepressor activity GO:0005515 protein binding GO:0016580 Sin3 complex GO:0045892 negative regulation of transcription, DNA-dependent GO:0006342 chromatin silencing GO:0008134 transcription factor binding GO:0032582 negative regulation of gene-specific transcription GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome |
| InterPro families | IPR010516 Sin3 associated polypeptide p18 IPR017250 Histone deacetylase complex, SAP18 subunit |
| Orthology group | MCL13183 |
Nucleotide sequence:
ATGGCAGGATTAGAGTCAATGGTTGTAGAGGAGGTTAGACCGGCAGAGAAGCCAGTTGAC
AGAGAGAAGACATGTCCATTATTGCTACGCGTCTTTTGCTCTACTGGAAGACACAACTCG
CCCGGTGATTACGCTCGAGGTAATGTTCCCCAAAACGAGTTACAAATTTACACATGGATG
GACGCCACTTTACGTGAACTTACTGGATTAGTCAAGGAAGTGAATCCTGAAACAAGGCGT
AAGGGAACGTACTTCGATTTTGCAATAGTATACCCAGATATGCGATCACCTACATATAGG
ATGAGAGAAATTGGTGTAACTTGTTCTGGTCAACGTGGCGGTGATGACAATAAGACACTT
TCCCAAGTTAAATTTCAAATTGGAAATTATTTAGATATATCAATAACTCCCCCAAATAGA
ATGCCACCTCCTATGCGAAGAGCACAGCCATATGTTAATAATCGTCCCTATTAA
Protein sequence:
MAGLESMVVEEVRPAEKPVDREKTCPLLLRVFCSTGRHNSPGDYARGNVPQNELQIYTWM
DATLRELTGLVKEVNPETRRKGTYFDFAIVYPDMRSPTYRMREIGVTCSGQRGGDDNKTL
SQVKFQIGNYLDISITPPNRMPPPMRRAQPYVNNRPY