| New model in OGS2.0 | DPOGS203210 |
|---|---|
| Genomic Position | scaffold117:+ 1582-5464 |
| See gene structure | |
| CDS Length | 1635 |
| Paired RNAseq reads | 771 |
| Single RNAseq reads | 1869 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011093 (0.0) |
| Best Drosophila hit | CG6006, isoform C (2e-91) |
| Best Human hit | solute carrier family 22 member 5 (4e-47) |
| Best NR hit (blastp) | PREDICTED: similar to CG6006 CG6006-PC [Tribolium castaneum] (3e-128) |
| Best NR hit (blastx) | PREDICTED: similar to CG6006 CG6006-PC [Tribolium castaneum] (8e-112) |
| GeneOntology terms | GO:0015226 carnitine transporter activity GO:0055085 transmembrane transport GO:0016021 integral to membrane |
| InterPro families | IPR005828 General substrate transporter IPR016196 Major facilitator superfamily, general substrate transporter IPR020846 Major facilitator superfamily IPR005829 Sugar transporter, conserved site |
| Orthology group | MCL18438 |
Nucleotide sequence:
GTTACAGTTATTCCAAGTCAAGGGTCTAAAGAGAAACATCCAGAGGTAACAAACGAAGAT
GACTCGGATGTTGTGTCCACTATCATTGGAGATTATGGAAGATGGCAGCTCTTAATGACT
TTCCTCTTATCTTTGTTCTCCTTTCCATGTACTTTTCACATATATTTACCAACGTTTACG
GCGAAAGCAACCAAATTCTGGTGTCAAAGGCCAGAAAATTTGTCGTCTTTACCTGTAGAC
GATTGGATAAATTACAGTCAGCCTGTAGACGCTTGCTCGATACGCATTTTGCCAGCTGGA
ATTACAGTAGAAAGTATTTTAAACAACACAGCTCCATTATTGGACTCGTTTCAAAAGTGT
ACTCAATGGGAATATGATAAATCAGAGGTTGGAGAAACAATAATTTCAGAATGGAATCTC
GTTTGCGATAACGCCAACCTGACAAGCCTAGGCGAGGTCGTTTTTTTAGTAGGCGTCGGA
GTGGGAGGAGTGGTGGGGGGTTGGATATCCGATAAATTTGGCCGTAAAAAGATTCTTATG
GGCATGGTAGTTGCACAAAGCGCACTCGCAATTATTTCGTTGCTTGTAAAATCATACTTA
CAGTATATGATGGTGAAGCTGGTGATGGGTCTGGTGTCAGTATCTGTCGTTTACGCAGCT
TTTGTACTGTCTGTAGAATTAGTTGGAGGCAAATGGGTCACCATAGCAGGGGTGTGCAAC
TTTTTTCCTCTACCGTTGGCATACATTATTGTATCCCTTCTATCATTGGCCATGCCAAAT
TGGAGGCAACTGCAATTAGCGTTATCAGTGCCAGGATGTTTTCTACTTTTGATGTGGTTT
GTGCTACCTGAATCTCCGAGATGGCTGTTAAATATGGGTAGAACTGAAGAAGCCCGAGAA
ATACTGGAAAGGGCAGCAAAATTTAATAAAAGAAACACGGTTGCCGATATAGACAAGCTT
CTTCTTTTACATAAAGTAGAGGAAGACAGAGAGGAACCTAGTGTCCTCATGTTGTTCAAG
GGATATTTATTAAAGAGGACTTTTTGCTTATTTATAGCGTGGTTTTCAATGACAATAGCA
TACTATGGACTCTTGTTAAATATCGGTAAATTCAATCTCGGCAATTTGCACCTTACATCA
ATCATACTTGCTGTAGTTGAAGTACCGGCAATTGCATTGAGTATTCCTATTCTATTGAAG
GCTGGTAGGCGTATACCGATCTGTATAACCATGTTCGTTTGTGGAGTCGCCTGTGTAACA
AGTGAACTACTTTCCATATTATATGATGATGTTTGGATAATCATATTTTGTCTGATGGTC
GGGAAGTTTGCTATCGGCGCAACGAACATGATGCTGCCTATTTACACCGCTGAGCTATAT
CCGACTGTGATAAGGAATCTCGGTGTTGGAGCAAGTCAAATATCTTCTGGACTGGCTCTC
ATTTGTATCCCATATTTATGGGAACTGACAAAACTAAACGAACATTTGCCGCTGGTGACT
ATTGCGGCATTGGGTGCGGCAGGCGGCGCCGTCGTCCTTCTACTACCAGACACAGTCAAC
TCAAAAGATAACAAAAAACCTAAAAACGTGTCTTGTAATGGAACATTCACAATCAGCGAC
GACAGGAGGTATTGA
Protein sequence:
VTVIPSQGSKEKHPEVTNEDDSDVVSTIIGDYGRWQLLMTFLLSLFSFPCTFHIYLPTFT
AKATKFWCQRPENLSSLPVDDWINYSQPVDACSIRILPAGITVESILNNTAPLLDSFQKC
TQWEYDKSEVGETIISEWNLVCDNANLTSLGEVVFLVGVGVGGVVGGWISDKFGRKKILM
GMVVAQSALAIISLLVKSYLQYMMVKLVMGLVSVSVVYAAFVLSVELVGGKWVTIAGVCN
FFPLPLAYIIVSLLSLAMPNWRQLQLALSVPGCFLLLMWFVLPESPRWLLNMGRTEEARE
ILERAAKFNKRNTVADIDKLLLLHKVEEDREEPSVLMLFKGYLLKRTFCLFIAWFSMTIA
YYGLLLNIGKFNLGNLHLTSIILAVVEVPAIALSIPILLKAGRRIPICITMFVCGVACVT
SELLSILYDDVWIIIFCLMVGKFAIGATNMMLPIYTAELYPTVIRNLGVGASQISSGLAL
ICIPYLWELTKLNEHLPLVTIAALGAAGGAVVLLLPDTVNSKDNKKPKNVSCNGTFTISD
DRRY