| New model in OGS2.0 | DPOGS203217 |
|---|---|
| Genomic Position | scaffold117:+ 192061-194939 |
| See gene structure | |
| CDS Length | 1641 |
| Paired RNAseq reads | 2874 |
| Single RNAseq reads | 7785 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011508 (9e-152) |
| Best Drosophila hit | CG8258 (0.0) |
| Best Human hit | T-complex protein 1 subunit theta (0.0) |
| Best NR hit (blastp) | chaperonin [Bombyx mori] (0.0) |
| Best NR hit (blastx) | chaperonin [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006457 protein folding GO:0005832 chaperonin-containing T-complex GO:0042623 ATPase activity, coupled GO:0051082 unfolded protein binding GO:0005524 ATP binding GO:0005875 microtubule associated complex GO:0007052 mitotic spindle organization GO:0031122 cytoplasmic microtubule organization |
| InterPro families | IPR002423 Chaperonin Cpn60/TCP-1 IPR012721 T-complex protein 1, theta subunit IPR017998 Chaperone, tailless complex polypeptide 1 IPR002194 Chaperonin TCP-1, conserved site |
| Orthology group | MCL14155 |
Nucleotide sequence:
ATGGCTTTACATGTACCAAAAGCACCGGGTGTACCCCAAATGTTAAAAGAAGGAGCTCGG
ATGTTTTCCGGTTTAGAAGAAGCAGTATACCGTAACATAAATGCATGCAAACAATTTGCC
CAAAGTGTGCGCTCAGCATATGGCCCGAATGGCATGAATAAAATGATCATCAATCACATT
GACAAACAGTTTGTCACAAGTGATGCTGGTACTATCATCAGAGAATTAGATGTTGAACAT
CCAGCTGCCAAGTTAATGGTTCTAGCTAGTCAAATGCAAGATGCTGAGGTTGGAGATGGT
ACAAACTTTGTAATTGTATTATCTGGAGCTCTTCTTGAGGCAGCCGAAGAGCTTCTACGT
CTAGGTGTGACGACGAGCGAAATTGCAGAAGGATACGAAAAGGCCCTTGATAAATGCCTA
GAAATCCTACCCCAGTTAATTTGCGATGAAATTAAAGATTGCAGAAATATGGATACTGTT
ATTAAAGGCATTAAACCATCTATCATGTCCAAACAGTATGGTAATGAAGACTTCATTGCT
GGGCTGGTAGCAAAAGCTTGTGTGGCTATTCTACCAGAAAATACAACATTTAATGTTGAT
AATGTCAGGATATGTAAGATCCTTGGTGCTGGGCTACTACAGTCTGAGGTATTGTCAGGA
ATGGTGTTTAAGAGAGAAGTTGAGGGTGATGTTGCCAGTGCATCAAAAGCCAAAGTAGCT
GTTTATTCCTGTCCTGTTGACATCACTCAAACTGAAACAAAGGGAACAGTACTCATCAAA
ACAGCCGATGAACTACTTAACTTTAGTAAAGGAGAGGAGTCTTTGTTAGAAAAACAGATT
AAAGCTATTGCCGACACTGGTGTAAAAGTTATTGTTGCTGGAGCTAAGTTTGGTGATATG
GCTTTACATTTCCTTAATAAATATAACATTATGGCGGTTCGTCTCAACTCAAAGTTTGAT
ATTCGTCGTCTCGCAAAGACTGTTAATGCTACTGTACTGCCAAAATTGACTACTCCAACG
GCTGAAGAGCTTGGATACTGTGACACGGTCAGAGTTGATGAAGTCGGTGATACAAGAGTA
GTTGTCTTCAGTATGGAAAGCAGTGAATCTAGAATTTCAACAGTTGTTATCAGAGGTTCA
ACTGACAATTACATGGATGACATTGAAAGAGCTATTAATGACGGTGTTAACACATTCAAG
GGAATAGCAAGAGACGGACGATTCTTGGCTGGCGCTGGAGCTACTGAAATTGAATTAGCT
CAACAGCTTTTACAGTATGCAGATACTCTTCCAGGACTTGAGCAATATGCAGTTCGTAAG
TTTGCTGTAGCTCTTGAGGGTGTTCCGAAAGCTCTTGCAGAAAATTCTGGAGCAAATGCC
ACTGAAGTTGTGAACAATATCTATAAAGCACACAGGGAAAACAACAAGTATGCTGGTTTT
GATATCGAATCTGAGAGTGCCGGAATTTGTGATGCAAAGGAAAAGGGAATTTTAGATTTA
TATGTCTTAAAATACTGGGGCCTTAAATATGCTGTTGGTGCTGCAACAACTATTTTGAAA
GTTGATCAAATCATTATGGCTAAAAGGGCAGGAGGGCCAAAAGCACCTAAACCCAATGCC
GGCAGTGATGATGAATCTTAA
Protein sequence:
MALHVPKAPGVPQMLKEGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHI
DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGALLEAAEELLR
LGVTTSEIAEGYEKALDKCLEILPQLICDEIKDCRNMDTVIKGIKPSIMSKQYGNEDFIA
GLVAKACVAILPENTTFNVDNVRICKILGAGLLQSEVLSGMVFKREVEGDVASASKAKVA
VYSCPVDITQTETKGTVLIKTADELLNFSKGEESLLEKQIKAIADTGVKVIVAGAKFGDM
ALHFLNKYNIMAVRLNSKFDIRRLAKTVNATVLPKLTTPTAEELGYCDTVRVDEVGDTRV
VVFSMESSESRISTVVIRGSTDNYMDDIERAINDGVNTFKGIARDGRFLAGAGATEIELA
QQLLQYADTLPGLEQYAVRKFAVALEGVPKALAENSGANATEVVNNIYKAHRENNKYAGF
DIESESAGICDAKEKGILDLYVLKYWGLKYAVGAATTILKVDQIIMAKRAGGPKAPKPNA
GSDDES