| New model in OGS2.0 | DPOGS214359 |
|---|---|
| Genomic Position | scaffold2164:- 24641-27354 |
| See gene structure | |
| CDS Length | 1152 |
| Paired RNAseq reads | 451 |
| Single RNAseq reads | 1312 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004127 (2e-111) |
| Best Drosophila hit | phosphorylated adaptor for RNA export, isoform B (2e-39) |
| Best Human hit | phosphorylated adapter RNA export protein (5e-17) |
| Best NR hit (blastp) | Phosphorylated adaptor for RNA export, putative [Aedes aegypti] (1e-53) |
| Best NR hit (blastx) | PREDICTED: similar to Phosphorylated adaptor for RNA export, putative [Tribolium castaneum] (2e-51) |
| GeneOntology terms | GO:0006408 snRNA export from nucleus GO:0007399 nervous system development |
| InterPro families | IPR019385 Phosphorylated adapter RNA export protein, RNA-binding domain |
| Orthology group | MCL14868 |
Nucleotide sequence:
ATGTCAACAACAGAAGGAGAACTGGATGTCGCAGAATTGGATGAATTAGAAGAGGGCGAG
TTAGAAGATTCCGACGTAGAATACGGTACGTATGTTCCACTTCCGAGGCCTGAAGCCATT
AAACTTCCGTCGCTCGTAAACATGCAAATTCAGGACGAACAGAGTGATGAGGATTCAGCC
CAAGAATCGTCAGGTTCAGAGTCGGACGATGAACCGCGAAGACGTGCTAAACGCACTAAG
CTGCGTCCCAAGAGGCCTCAACAGCAGGCCCACAGTGCTAAAAAAGATAAATATAATATT
TGGTGCAAAGCATTGGAGGAAGATATTTTAACAGAAGATATGGTTAGCTGTGATGTGTCA
AAGAAAAGTAGATATGGCGTTGAATCTTATGATTACACTATTAGCAATAAGGAACACTCT
ACAAATAAAAGAAGTTACTCTGACCGTTCAAATGTTAAACTAAGGCTTGGAAAAAGAACA
AACAGTGAACAGCCATCAGAGAGTAAACAAAATCCAAGAAACTTGATAGATTTGTGTGTG
ACCTCAGAACATCCTATAGAGCAAATTGCTCAAGATATAGCAGAGAAATTGTCAGAAGAA
AAAACTGAATTAGTCGGTAGGATAGTGGCAGTGCTTGGTGCTAAGAAGGCTATAGAAATA
TACAAGGAGACACAAAGAATTGAAGCTGATGGAGGTATGCTGGTGATGAATGGGACACGA
AGACGTACACCAGGCGGCATATACTTCTTTTTACTGAAGCGGGATGATGATGTGTCTCAA
GATATGATTAATCAAATATTTACTGAGGATCGAAAGAACACTGCACGCAGGCTAAAACAA
ACGCGGGCTCGGAGTCGCCAAAAGGTTATGGAGCAGTTAAAACAAAGTCTCACAGATTCA
GAACTGCCATCTCTTCTTTCACGAGGTGAGGCTACTGTTCAATCAGAACACGGCTCCAAT
CCTCCGCCTTCTCCAGCGACCGATGCTCGGGACTGTTCCAGCGATACTGACGGGCACTCA
CACATAGAACAGCCGCCCTCCCCCCCACGCCCCAGATCTCCTCTACCTGACCGGACCTCC
AGGGAGATACAGCAGTACGACGATGATGACTTCTTAGAGGTCATGTGCAATGACGACATG
GACATGTTCTAA
Protein sequence:
MSTTEGELDVAELDELEEGELEDSDVEYGTYVPLPRPEAIKLPSLVNMQIQDEQSDEDSA
QESSGSESDDEPRRRAKRTKLRPKRPQQQAHSAKKDKYNIWCKALEEDILTEDMVSCDVS
KKSRYGVESYDYTISNKEHSTNKRSYSDRSNVKLRLGKRTNSEQPSESKQNPRNLIDLCV
TSEHPIEQIAQDIAEKLSEEKTELVGRIVAVLGAKKAIEIYKETQRIEADGGMLVMNGTR
RRTPGGIYFFLLKRDDDVSQDMINQIFTEDRKNTARRLKQTRARSRQKVMEQLKQSLTDS
ELPSLLSRGEATVQSEHGSNPPPSPATDARDCSSDTDGHSHIEQPPSPPRPRSPLPDRTS
REIQQYDDDDFLEVMCNDDMDMF