| New model in OGS2.0 | DPOGS214325 |
|---|---|
| Genomic Position | scaffold2164:+ 37343-40655 |
| See gene structure | |
| CDS Length | 1347 |
| Paired RNAseq reads | 601 |
| Single RNAseq reads | 1818 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003997 (2e-167) |
| Best Drosophila hit | suppressor of variegation 2-10, isoform I (3e-99) |
| Best Human hit | E3 SUMO-protein ligase PIAS3 (4e-86) |
| Best NR hit (blastp) | PREDICTED: similar to Suppressor of variegation 2-10 CG8068-PI, isoform I [Apis mellifera] (1e-126) |
| Best NR hit (blastx) | PREDICTED: similar to Suppressor of variegation 2-10 CG8068-PI, isoform I [Apis mellifera] (8e-111) |
| GeneOntology terms | GO:0017151 DEAD/H-box RNA helicase binding GO:0005654 nucleoplasm GO:0030261 chromosome condensation GO:0005652 nuclear lamina GO:0005700 polytene chromosome GO:0003677 DNA binding GO:0005634 nucleus GO:0051276 chromosome organization GO:0035012 polytene chromosome, telomeric region GO:0005737 cytoplasm GO:0048749 compound eye development GO:0007446 imaginal disc growth GO:0046425 regulation of JAK-STAT cascade GO:0042176 regulation of protein catabolic process GO:0030097 hemopoiesis GO:0046426 negative regulation of JAK-STAT cascade GO:0003676 nucleic acid binding GO:0008270 zinc ion binding |
| InterPro families | IPR004181 Zinc finger, MIZ-type IPR023321 PINIT domain |
| Orthology group | MCL10948 |
Nucleotide sequence:
ATGGTTAAAACACGTTCTTCAGCGAGGGTAGTGAACGCTGCCCAGGGCGAGGCCACCGCA
AATGGAAACTCTACCGATCTTAGACAACGGCTAAAAGCCTGTGACAATAGACCACGTCAG
CAAAAAAACTACACCTCTAGGCAAGTGTCACACACAGAATGTCCAGACTGGCTGCAGCTG
AACAGCCAAGCGTTGTCTTCGGGCGGGCCCGGCAGCGCTCAGGGCAAGGATCCCCTGGCC
CCGGCGATATCGGGTTCGAGAGCCATGTACCAACATCCGGCCGCGCGGCAGAACCCTTTG
TACGCGGGCAGTATGTACCACTACAGCGGCTCGGGCGCCACGCTGGCCCCCATGCCGTCC
CCGTCACCCACCGCGCCACTGCCGCCCTTCCCAGTGCATCCTGACGTCAAGTTTAAGAAA
TTACCTTTCTACGATGTGTTGGCGGAACTGATGAAGCCGTCTACAATGATGCCGATGCAA
GCTGGTCGCATGCAGGAGGGCACCTTCATCTTCCACCTCACGCCGCAGCAGGCCACTGAG
ATAGCATCAGGGAAAGACATCGTTGGCACCAGCAATAAACTCGATTATGTTATACAGGCG
CAATTGAGGTTCTGCCTTCTAGAAACTTCATGCGAACAAGAGGATTATTTCCCACCTAGT
GTTAATGTTAAAGTTAATAATAAGATGTGTCCGTTACCAAACCCAGTACCTACTAACAAA
CCTACTCCGGAGCCAAAGCGGCCGCCGCGGCCTGTGAATATATCGTCTCTCGTGAAGTTG
TCTCCTACAGTAGCCAACACTATCCACGTGACGTGGGCGGCTGATTTCACACGAGCGTAC
GTCCTCAGCGTGTTCATGGTCAGGAAGCTAACGTCAGCGGAGCTGTTGCAGAGGCTGAAG
AATAAGGGAACCAAGAACCCAGACTACACGAGATCTTTGATTAAAGAGAAACTATCAGAG
GACTACGACAGCGAGATAGCGACGACATCCCTCCGCGTGTCCTTAATGTGTCCGCTGGGA
AAGATGCGTATGTCGTGTCCGTGTCGACCAGCGAACTGTCCACACCTGCAGTGCTTCGAC
GCCTCACTCTTCCTTCAGATGAACGAACGGAAACCCACGTGGCTCTGTCCCGTCTGTGAC
AGACCGGCGCCTTACGACTCTCTAGTCGTTGATGGGTACTTCCAAGAGGTTCTAACGTCG
CCTCGCCTGGCCAGCGAGTGTAACGAGATCCAGCTTCACGCGGACGGCAGCTGGTCCGCC
CACGCGCCCCCGCCCCGCGCCCCGCCGCCCGCCGCGCCCGCCGCCGAGCCCGTCACTCTC
ATATCCGACGACCTTGGTCAGTACTAG
Protein sequence:
MVKTRSSARVVNAAQGEATANGNSTDLRQRLKACDNRPRQQKNYTSRQVSHTECPDWLQL
NSQALSSGGPGSAQGKDPLAPAISGSRAMYQHPAARQNPLYAGSMYHYSGSGATLAPMPS
PSPTAPLPPFPVHPDVKFKKLPFYDVLAELMKPSTMMPMQAGRMQEGTFIFHLTPQQATE
IASGKDIVGTSNKLDYVIQAQLRFCLLETSCEQEDYFPPSVNVKVNNKMCPLPNPVPTNK
PTPEPKRPPRPVNISSLVKLSPTVANTIHVTWAADFTRAYVLSVFMVRKLTSAELLQRLK
NKGTKNPDYTRSLIKEKLSEDYDSEIATTSLRVSLMCPLGKMRMSCPCRPANCPHLQCFD
ASLFLQMNERKPTWLCPVCDRPAPYDSLVVDGYFQEVLTSPRLASECNEIQLHADGSWSA
HAPPPRAPPPAAPAAEPVTLISDDLGQY