New model in OGS2.0 | DPOGS200492  |
---|---|
Genomic Position | scaffold1310:+ 828-27393 |
See gene structure | |
CDS Length | 915 |
Paired RNAseq reads   | 986 |
Single RNAseq reads   | 2706 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005094 (2e-64) |
Best Drosophila hit   | ABC transporter expressed in trachea, isoform C (7e-63) |
Best Human hit | ATP-binding cassette sub-family G member 1 isoform 4 (2e-58) |
Best NR hit (blastp)   | PREDICTED: similar to CG4822 CG4822-PA [Acyrthosiphon pisum] (3e-78) |
Best NR hit (blastx)   | PREDICTED: similar to CG4822 CG4822-PA [Acyrthosiphon pisum] (5e-70) |
GeneOntology terms    | GO:0043190 ATP-binding cassette (ABC) transporter complex GO:0042626 ATPase activity, coupled to transmembrane movement of substances GO:0005215 transporter activity GO:0016021 integral to membrane GO:0005524 ATP binding |
InterPro families    | IPR003439 ABC transporter-like IPR020064 ABC transporter, G1-like IPR017871 ABC transporter, conserved site IPR003593 ATPase, AAA+ type, core |
Orthology group | ND |
Nucleotide sequence:
ATGTCTAATGTGCCTTTGGTTCGTCGCGCGATTGCTGGTGCAACATTTGCTCAAACCTCC
ACTTCGATTGACGTCCCTTCAATGAATCCTGAAGGCGACCATTGGGCCCCAGCTGCTTTA
GAACGAGCTGGCTCAACATTAAAGGCTCTCCATCGTATGGCAAAACGTCCCCCAGTTCAT
ATCATATTCGAAGATGTCGGATACACAGTTAACGCAAGCGAAGGTGAGAGGACAATTCTT
CACAACGTATCAGGTGAGTTTCGGTCTGGGGAGCTGACTTGCATACTTGGACCCTCAGGA
GCTGGAAAATCCACTTTGCTGAACATCCTCGCTGGGTATACATTGTCCGGTGTCAATGGT
AGAATAACCGTGAACGGTCAAGCTAGGGATATGAGGGTGTTTAAAAAACTCAGCAGCTAC
ATCATGCAGGATGACATATTGCAGCCAAGGCTGACAGTCAACGAATCATTGAAGATAGCT
GCGGAGCTTAAACTGGGTTCAGAACTAGGGAAAGCTGAAAAGGCACTCGTGGTGGAGGAA
ATTCTACAAACTTTGGGACTATGGGATCATAGAGACACCATGTCACAAAGTCTCTCTGGA
GGACAATCGAAACGTCTGTCAATTGCCTTGGAACTGGTCAACAATCCACCGATTATATTC
CTCGATGAACCCACAACCGGTCTAGATATTGTATCTGTTCGTCAGTTGGTAGTCCTGCTT
CGTCTCCTCTCACGTCAAGGCCGAACTATCATTTGTACGATCCACCAACCATCAGCATCG
CTGTTTTCACTATTCGACCGAGTCTACGTTTTATCCCGCGGACTGTGCTGTTATCAGGTA
ACATTTTTTAAACGATATACTCGTCTTTGTTATATTTTCAATTTAATTAATCTCTTATTT
AATAATAAAGTCTAA
Protein sequence:
MSNVPLVRRAIAGATFAQTSTSIDVPSMNPEGDHWAPAALERAGSTLKALHRMAKRPPVH
IIFEDVGYTVNASEGERTILHNVSGEFRSGELTCILGPSGAGKSTLLNILAGYTLSGVNG
RITVNGQARDMRVFKKLSSYIMQDDILQPRLTVNESLKIAAELKLGSELGKAEKALVVEE
ILQTLGLWDHRDTMSQSLSGGQSKRLSIALELVNNPPIIFLDEPTTGLDIVSVRQLVVLL
RLLSRQGRTIICTIHQPSASLFSLFDRVYVLSRGLCCYQVTFFKRYTRLCYIFNLINLLF
NNKV